Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq67 105 6e-18 >seq67 Length=41086 Score = 105 bits (116), Expect = 6e-18 Identities = 223/333 (67%), Gaps = 0/333 (0%) Strand=Plus/Minus Query 20245 AACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAA 20304 ||| || || | ||| | ||| || | |||||| |||||||||||||| ||||| || Sbjct 28868 AACTTGGGCTATCATGTGAGTAAAAATAGAATAGGAAGCAATGTTAAAAGGTACTCCTAA 28809 Query 20305 ACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAA 20364 |||| || | || || ||||||| |||||| | | | ||| | |||||| Sbjct 28808 GCCCAAATCACAAGATCTTTGATACATTATACAGGACAATTTATTTTCAAAAATATAAAA 28749 Query 20365 TTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGC 20424 |||||||| | |||||||| || | ||||| || || || ||||| || Sbjct 28748 CTGACATAATACATGACAGGGAGGTAATGCCATTTTTTCTAAATCTTTAGGATTCCATGC 28689 Query 20425 ACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAA 20484 ||| | || |||||||||| | |||| |||||| |||||||| | | | || Sbjct 28688 ACATAATATAATTCTTCTATTCTTAGGATCATTTTTAATTAAATCAATTACATTTTTTAA 28629 Query 20485 TTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTG 20544 ||| |||| || | |||||| ||| ||| | || | || | || ||||| || Sbjct 28628 TTGATCAACACCTTTATTTGTATAATCATCATGCATGTTCGTATATTCTGCACCAAAATG 28569 Query 20545 CCTCCACTGGAAACCGTAAACAGGTCCCAAATC 20577 |||||||| || || || | ||||| ||||| Sbjct 28568 TCTCCACTGAAATCCATATATGGGTCCTAAATC 28536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441356342311720