Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq483 116 9e-21 seq23 114 3e-20 seq3 105 2e-17 >seq483 Length=14038 Score = 116 bits (128), Expect = 9e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| ||||| ||||| || | || | ||||||||| ||||||||||| || || Sbjct 5900 TTCTTTCTGGATGTTATAATCCAATAAAGTTCTTCCGTCTTCCAATTGTTTTCCAGCAAA 5841 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| | | |||||| ||| ||||||||||| || |||||||| || ||||| || Sbjct 5840 GATTAATCTTTGTTGATCTGGTGGAATTCCTTCTTTGTCTTGGATTTTGGCCTTCACATT 5781 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| |||| || ||||| ||||| | || || || || || || | ||||| || Sbjct 5780 TTCAATAGTGTCTGATGATTCCACTTCCAAGGTAATGGTTTTTCCAGTTAAGGTCTTAAC 5721 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 5720 GAAAATCTGCAT 5709 Score = 113 bits (124), Expect = 1e-19 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| ||||| || || || | | || | ||| ||||||||||||||||| || || Sbjct 6128 TTCTTTCTGGATGTTGTAATCAGATAAAGTTCTTCCATCTTCTAATTGTTTTCCGGCAAA 6069 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| | | |||||| ||| ||||||||||| || |||||||| || || || || Sbjct 6068 GATTAATCTTTGTTGATCTGGTGGAATTCCTTCTTTGTCTTGGATTTTGGCCTTTACATT 6009 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| |||| ||| ||||||||||| | || || || || || || | || || || Sbjct 6008 TTCAATAGTATCTGATGATTCTACTTCCAATGTAATGGTTTTTCCCGTTAATGTTTTAAC 5949 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 5948 GAAAATTTGCAT 5937 Score = 107 bits (118), Expect = 5e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||||||||| || || || | | || | ||||||||| ||||||||||| || || Sbjct 6356 TTCTTTTTGGATGTTGTAATCAGATAAAGTTCTTCCGTCTTCCAATTGTTTTCCAGCAAA 6297 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| | | |||||| ||| ||||||||||| || |||||||| || || || || Sbjct 6296 GATTAATCTTTGTTGATCTGGTGGAATTCCTTCTTTGTCTTGGATTTTGGCCTTTACATT 6237 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| |||| || ||||| ||||| | || || || || || || | || || || Sbjct 6236 TTCAATAGTGTCTGATGATTCCACTTCCAATGTAATGGTTTTTCCCGTTAATGTTTTAAC 6177 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 6176 GAAAATTTGCAT 6165 Score = 87.8 bits (96), Expect = 4e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| ||||| || || || | | || | ||||||||| ||||||||||| || || Sbjct 5672 TTCTTTCTGGATGTTGTAATCAGATAAAGTTCTTCCGTCTTCCAATTGTTTTCCAGCAAA 5613 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| | | |||||| ||| ||||||||||| || |||||||| || ||||| || Sbjct 5612 GATTAATCTTTGTTGATCTGGTGGAATTCCTTCTTTGTCTTGGATTTTGGCCTTCACATT 5553 Query 288402 TTCTATAG 288409 || |||| Sbjct 5552 CTCAATAG 5545 >seq23 Length=57594 Score = 114 bits (126), Expect = 3e-20 Identities = 232/342 (68%), Gaps = 2/342 (1%) Strand=Plus/Plus Query 72420 GCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATACTCCG 72479 || ||||| || || || | ||||| ||| |||||||||||||||| ||||||||||| Sbjct 43845 GCTTCTTCTTCTGAATTATTTGGAAGAGTACAAGAAATTCCTCAGAATGAAAATACTCCT 43904 Query 72480 TTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAAAAAT 72539 |||| ||| ||||| | | |||| || || || ||| || || ||| Sbjct 43905 TTTTTTCCCATTTCTCCTTATGCTATTGCTAAACAATATGCACATTTCATTACTATCAAT 43964 Query 72540 TACCGTGAGTCGTATAACATGTATGTATGCAACTCG-ATTTGTTTCAATCACGAGAGTCC 72598 || | || || || || |||| | | || | | | |||| || ||||| || ||||| Sbjct 43965 TATAGAGAATCATACAATATGTTT-TGTGTTAATGGTATTTTATTTAATCATGAAAGTCC 44023 Query 72599 CAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATTTTCAA 72658 | ||||| | || || ||||| ||||| || || | | || || |||| || Sbjct 44024 TAGAAGAGGAGAAACTTTTGTTACTCGAAAAATTACAAAAGGAATAGCCAAAATTTGTAA 44083 Query 72659 TGGTGTCGAAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGGATATGC 72718 | | ||||| || || | | || |||||||||| | |||||||||||| | || Sbjct 44084 AAATATAGAAAAGTGTATTACTTTAGGAAATATAGATGTATATAGAGATTGGGGACACGC 44143 Query 72719 GAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGA 72760 || ||||| ||| | || |||| | ||||| |||||||| Sbjct 44144 TAAAGATTATGTACATGCGATGTATCTAATGCTTCAACAAGA 44185 >seq3 Length=82673 Score = 105 bits (116), Expect = 2e-17 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||||||||| || || | || || || ||||| ||||||||||| || || Sbjct 24736 TTCTTTTTGGATATTGTAATCCGAAAGGGTTCGGGAATCTTCCAATTGTTTTCCAGCAAA 24795 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || | ||||| ||| | || || ||||| ||||| || ||||| | |||||| || Sbjct 24796 TATTAATCGCTGCTGATCAGGAGGAATGCCTTCCTTATCTTGAATTTTGGTTTTCACATT 24855 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| ||| ||| | | || ||||| || || || || || ||||| | ||||| || Sbjct 24856 TTCAATAATATCATTTGGCTCCACTTCAAGGGTTATAGTTTTACCGGTTAACGTCTTCAC 24915 Query 288462 GAATATCTGCATT 288474 || || |||||| Sbjct 24916 AAAGATTTGCATT 24928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179609313977474