Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq3 109 5e-19 seq483 100 3e-16 seq444 95.1 1e-14 >seq3 Length=82673 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || || ||||| | |||| || | ||| ||||||||||| || |||||||| | Sbjct 24701 CCTCCTCGTAATCTCAAAACTAAGTGCAACGTAGATTCTTTTTGGATATTGTAATCCGAA 24760 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| || | ||||| | || || || ||| | || | |||||||| || |||||| Sbjct 24761 AGGGTTCGGGAATCTTCCAATTGTTTTCCAGCAAATATTAATCGCTGCTGATCAGGAGGA 24820 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || ||||| || ||||| ||||| || ||| || | ||||| | |||||| Sbjct 24821 ATGCCTTCCTTATCTTGAATTTTGGTTTTCACATTTTCAATAATATCATTTGGCTCCACT 24880 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | |||| || || ||||| || || || || || ||||||||||| Sbjct 24881 TCAAGGGTTATAGTTTTACCGGTTAACGTCTTCACAAAGATTTGCATTTT 24930 >seq483 Length=14038 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285 ||||| | |||| || | || ||||||||||| ||||||||||| | | || | Sbjct 6382 AATCTTAAAACTAAGTGTAAGGTGGATTCTTTTTGGATGTTGTAATCAGATAAAGTTCTT 6323 Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345 ||||||| | || || || ||| | || | | || || || || |||||||||||| Sbjct 6322 CCGTCTTCCAATTGTTTTCCAGCAAAGATTAATCTTTGTTGATCTGGTGGAATTCCTTCT 6263 Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405 || ||||| ||||| ||||||| || | || || | |||||||| | || Sbjct 6262 TTGTCTTGGATTTTGGCCTTTACATTTTCAATAGTGTCTGATGATTCCACTTCCAATGTA 6203 Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | ||| || || || || ||||| |||||||||||||| Sbjct 6202 ATGGTTTTTCCCGTTAATGTTTTAACGAAAATTTGCAT 6165 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285 ||||| | |||| || | || |||||||| || ||||||||||| | | || | Sbjct 6154 AATCTTAAAACTAAGTGTAAGGTGGATTCTTTCTGGATGTTGTAATCAGATAAAGTTCTT 6095 Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345 | ||||| | || || |||||| | || | | || || || || |||||||||||| Sbjct 6094 CCATCTTCTAATTGTTTTCCGGCAAAGATTAATCTTTGTTGATCTGGTGGAATTCCTTCT 6035 Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405 || ||||| ||||| ||||||| || | ||||| | || ||||| | || Sbjct 6034 TTGTCTTGGATTTTGGCCTTTACATTTTCAATAGTATCTGATGATTCTACTTCCAATGTA 5975 Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | ||| || || || || ||||| |||||||||||||| Sbjct 5974 ATGGTTTTTCCCGTTAATGTTTTAACGAAAATTTGCAT 5937 >seq444 Length=15175 Score = 95.1 bits (104), Expect = 1e-14 Identities = 322/496 (65%), Gaps = 17/496 (3%) Strand=Plus/Plus Query 154586 AGACGCCAAGTTGCAAACGGCAATTTCTTCAGAACTACTGTATTGCACAATTTCTGCGCA 154645 ||| || || ||||||||||| | ||| | | | | |||| |||||||| ||| Sbjct 5217 AGAAGCTAAATTGCAAACGGCTACTTCCCCTGGAGATGTATATTCTACAATTTCGCAGCA 5276 Query 154646 CAAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTC 154705 ||||| || ||| ||| || |||| ||||| ||||| |||||| ||| || || || Sbjct 5277 TAAATTGCTACATTTAATAGTTCCCAAGTTTTGTTGATTGGATTTGGAGTTACAAGCATC 5336 Query 154706 TTTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTGTGCGAAACAG 154765 ||| || || || || ||||| || ||||| | ||| ||| | ||| || || || Sbjct 5337 TTTATATAACATATATGGGGTTCCTGTTTCTATTTGACTTTGTAAAAT--GGCAAACCAT 5394 Query 154766 ACTTC--GCGCCTCAACTTGACAAGT---AAATCGATTTTCGCTCTCATATTGTTCGTAC 154820 | || | || ||| | | |||| | ||| ||||||| | ||| Sbjct 5395 AAATCTTGAGCTGGTACTGTTCTTTTTCCTAATCCTTCTTC---TTCATATTTTGTGTAT 5451 Query 154821 AGTTTTTCAAACTCTAAACTGTACACG--TCCGACAAACCGGGACAGCGGTCGGGACACA 154878 | ||||||||| ||| || || | || |||||| ||||| || ||||||| Sbjct 5452 AATTTTTCAAATTCT--TCTCCCCAGGTTTCACTCAAACCAGGACATTCGTTAGGACACA 5509 Query 154879 TCAATGACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAG 154938 | || | ||| || |||| || ||| | ||||||||| | ||| || | ||| | || Sbjct 5510 TTAAAGTCCATTCTTTATTTTCTTTTACTCTTTTCATAAAGAGATCAGGAATCCAGAGAG 5569 Query 154939 CGTACAACAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAA 154998 | || || ||||| | || || ||||| || |||| | |||| |||| Sbjct 5570 CATAAAATAAATCTCTTGCTCTTAATTCTTCTTTTCCGTGGTTTTTTCTCAAATCTAAAA 5629 Query 154999 AATCATATATGTCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCCTTTGCGTTTT- 155057 | ||| ||| || | |||||||| || | ||| | || | | ||||| | |||| Sbjct 5630 ATTCAAATACATCTGAATGCCACGGTTCAATATAAATTGCAAAAGAACCTTTTCTTTTTC 5689 Query 155058 --CCTCCTTGATCCAC 155071 || |||||||| || Sbjct 5690 CGCCCCCTTGATCTAC 5705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499626169494520