Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq444 129 7e-25 >seq444 Length=15175 Score = 129 bits (142), Expect = 7e-25 Identities = 519/812 (64%), Gaps = 9/812 (1%) Strand=Plus/Plus Query 110329 GTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGA 110388 || ||||| | |||||| || || ||| || ||||| |||||||| | ||| Sbjct 5254 GTATATTCTACAATTTCGCAGCATAAATTGCTACATTTAATAGTTCCCAAGTTTTGTTGA 5313 Query 110389 TTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGT 110448 || ||||||||||| || ||||| ||||| | ||| |||||||| || ||||| | | | Sbjct 5314 TTGGATTTGGAGTTACAAGCATCTTTATATAACATATATGGGGTTCCTGTTTC--TATTT 5371 Query 110449 GACTT--GAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTT 110506 ||||| | |||||| ||||| ||| || || || ||| || | | |||| Sbjct 5372 GACTTTGTAAAATGGCAAACCATAAATCTTGAGCTGGTACTGTTCTTTTTCCTAATCCTT 5431 Query 110507 CCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCT 110566 | || || || || ||||| || | |||||||| | ||| | ||| | ||| Sbjct 5432 CTTCTTCATATTTTGTGTATAATTTTTCAAATTCTTCTCCCCAGGTTTCACTCAAACCAG 5491 Query 110567 TCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACA 110626 | || ||||| | | | ||| | | | || | || || ||||| || | Sbjct 5492 GACATTCGTTAGGACACATTAAAGTCCATTCTTTATTTTCTTTTACTCTTTTCATAAAGA 5551 Query 110627 GGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGT 110686 | ||||||||||| | || | || | || | | ||||| | || |||| Sbjct 5552 GATCAGGAATCCAGAGAGCATAAAATAAATCTCTTGCTCTTAATTCTTCTTTTCCGTGGT 5611 Query 110687 TGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA 110746 | | | || ||||| || | | ||| || ||||| ||||| | ||| | || | Sbjct 5612 TTTTTCTCAAATCTAAAAATTCAAATACATCTGAATGCCACGGTTCAATATAAATTGCAA 5671 Query 110747 TGGATCCCTTAC---GACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCC 110803 || || || | | ||| | || | ||||| | || ||| |||| || || | Sbjct 5672 AAGAACCTTTTCTTTTTCCGCCCCCTTGATCTACATATCTAGCAGTGTCATTAAACACTC 5731 Query 110804 TGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGG 110863 | | |||||| |||| |||| ||| | || || || || ||||| || || | Sbjct 5732 TTAACATAGGTATAAGCCCATTGGAATTTCCGTTGGTTCCTCTAATGTAAGAATTTTGAC 5791 Query 110864 CACGAATGTCGTGGATATGC-ATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC 110922 | | | || || | ||| | ||||||||| || || || ||||| ||||||| Sbjct 5792 CTCTTACATCTTGCA-CTGCTACACCAATACCTCCTGCTGTTTTGCTAATCAGTGCACAT 5850 Query 110923 TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAA 110982 | | | || || ||||||| ||||| ||||| | || ||| | || ||||||| Sbjct 5851 TGCTTTAAAGTTTCAAAAATACCTTCAATGGAATCGGACTGAATGGACAATAAAAAGCAA 5910 Query 110983 GAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAAC 111042 |||||||| || || | || ||||| | ||||| | || || || ||||| | || Sbjct 5911 GAAGACATTTGTGGTCTTGGAGTTCCGGAGTTGAACAAAGTCGGAGTAGCATGGGTAAAA 5970 Query 111043 AGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATA 111102 |||||||||| | ||||| || | ||| ||||| | | ||||||| Sbjct 5971 TATTTTTGGGACATCAAATGATATGTTTCCAATGCTCTATCAACATCATCAATGTGAATA 6030 Query 111103 CCAATGGCAACTCGCATGAACATATATTGAGG 111134 ||||| | ||||| ||| |||| || ||| || Sbjct 6031 CCAATAGAAACTCTCATCAACAAATGTTGTGG 6062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588954038557400