Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq67 102 1e-16 >seq67 Length=41086 Score = 102 bits (112), Expect = 1e-16 Identities = 287/430 (67%), Gaps = 12/430 (3%) Strand=Plus/Plus Query 104995 TGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATATATCGACTG 105054 |||||||||||| || ||||||||||| ||||||||| ||| || |||||| ||| Sbjct 28535 TGATTTAGGACCCATATATGGATTTCAGTGGAGACATTTTGGTGCAGAATATA-CGAACA 28593 Query 105055 TG-ATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTCAAGTTATAGAAACTATAA 105113 || || || ||||| ||||| | || ||||||| | || || || || | Sbjct 28594 TGCATGATGATTATACAAATAAAGGTGTTGATCAATTAAAAAATGTAATTGATTTAATTA 28653 Query 105114 AAAATAACCCCGGGTGTCGAAGAATAATTATAGATAGTTGGAATGTGTCACAATTATCAG 105173 ||||| | || | | ||||||| || || | |||||| | | ||| | Sbjct 28654 AAAATGATCCTAAGAATAGAAGAATTATATTATGTGCATGGAATCCTAAAGATTTAGAAA 28713 Query 105174 ATATGGCTCTTCCACCGTGTCAT-TGTTTGGTACAATTTTACATTAGAAATAAAATTTAT 105232 | ||||| | || || |||||| | || || || ||||| ||| | ||| | | Sbjct 28714 AAATGGCATTACCTCCCTGTCATGTATTATGT-CAGTTTTATATT---TTTGAAAATAAA 28769 Query 105233 TTAGATTGTCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATATAATATT 105292 || ||| | |||||||||||||| ||||| || ||||| ||||| | ||| ||| Sbjct 28770 TTGTCCTGTATAATGTATCAAAGATCTTGTGATTTGGGCTTAGGAGTACCTTTTAACATT 28829 Query 105293 GGTTTCTATTC-ATTTTTGGT-GTGTGTTCTCTCAAAATGGTGTAATCTAACCCCCGGAA 105350 | || |||||| |||||| | || | | ||| | |||||| ||| || Sbjct 28830 GCTTCCTATTCTATTTTTACTCACATGATAGCCCAAGTT--TGTAATTTAATTCCATATG 28887 Query 105351 AATTTATTCATACTTTTGGAGATGTTCATGTATATTCTAACCATGTTGACCAATTAAAAA 105410 ||||||| |||| || ||| ||| ||| | ||| || |||||||| || ||||||| Sbjct 28888 AATTTATCCATATATTAGGAAATGCACATATTTATATGAATCATGTTGATCAGTTAAAAA 28947 Query 105411 TTC-AATTAA 105419 | |||||| Sbjct 28948 AACAAATTAA 28957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658378649790680