Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq42 300 1e-75 seq30 210 2e-48 seq439 143 2e-28 seq483 140 3e-27 seq3 125 6e-23 seq643 118 9e-21 seq256 107 2e-17 seq67 93.3 3e-13 seq76 89.7 4e-12 >seq42 Length=47982 Score = 300 bits (332), Expect = 1e-75 Identities = 613/895 (68%), Gaps = 33/895 (4%) Strand=Plus/Plus Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786 || ||| ||| ||| || | || || | ||||||||| | ||| || ||||||| Sbjct 39741 GGTACTTTTGATGTATCTTTATTAACTATTGAAGATGGTATTTTTGAAGTGAAAGCTACT 39800 Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGGTGTGTT 551846 ||| ||| | ||| | || || |||||||||||||| ||| | || | ||||| Sbjct 39801 GCTGGTGATACCCATTTGGGAGGAGAAGATTTTGATAACAGATTAGTGAACTTTTGTGTA 39860 Query 551847 GAAGATTTTAAACGAAAAAACAAAGTT---GATCTATCTA-CATCTGCCAAAGCTCTTCG 551902 |||||||| ||| |||| |||| || ||| | ||| || | || | |||| | | Sbjct 39861 GAAGATTTCAAAAGAAAGAACAGAGGAAAGGATTTGACTAACAACAGC-AGAGCTTTAAG 39919 Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962 | ||||||| || ||||| || ||| || | | |||||| |||||| | || Sbjct 39920 AAGATTAAGAACACAATGTGAAAGGGCTAAAAGAACATTGTCATCTTCTACTCAGGCAAC 39979 Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022 |||||| | || ||||| | ||| || |||||||| | | | ||| || || Sbjct 39980 AATTGAAATTGACTCATTGTATGAAGGTATTGATTACAGTGTATCAATTAGTAGAGCTCG 40039 Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082 ||||||||| | || ||| |||||| | || | |||||||||| | ||||| Sbjct 40040 ATTTGAAGAATTGTGCATTGACTATTTTAGAGATACCTTGTCACCAGTAGAAAAGGTTTT 40099 Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142 | |||| ||| ||| || ||| | ||||||||| |||| | |||||||| || || Sbjct 40100 GAAAGATGCAATGATGGACAAAAAGAGTGTACATGAAGTTGTTTTAGTTGGTGGTTCAAC 40159 Query 552143 AAGAATTCCTAAAATTCGCGAAA---TG-TTAAGTTCTTATTTCAATGGTAAAAAA--TT 552196 | ||||| || || | ||| || ||||| || ||| ||||| || || || Sbjct 40160 TCGTATTCCAAAGATCC---AAACTTTGATTAAGGAATTTTTT-AATGGAAAGGAAGCTT 40215 Query 552197 AA--ATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCT 552254 || | | || ||||| || |||||||| |||||||| || | || || ||| Sbjct 40216 GCCGATCCA----TCAACCCAGACGAAGCTGTTGCTTATGGTGCTGCTGTCCAGGCTGCT 40271 Query 552255 ATTCTTTCTGGA---CAAACTGATGAAAAACTACAAAATATTGTACTTGT-AGATGTTAC 552310 ||| | ||||| ||| || || ||||| || |||| |||| |||||| | Sbjct 40272 ATTTTATCTGGTGACCAATCTAGTGCTG---TACAAGAT-TTGTTGTTGTTAGATGT--C 40325 Query 552311 TCCTCTATCTCTT--GGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGA 552368 | |||| | |||| ||||||||||| | ||||||| | |||||||| | || || ||| Sbjct 40326 TGCTCTTTGTCTTTAGGTTTAGAAACCGCTGGAGGTGTAATGACTAAGTTGATTGAGAGA 40385 Query 552369 AATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACT 552428 ||||| || ||||| || ||| | | || |||| ||| | ||||| ||| || Sbjct 40386 AATACAACAATTCCAGCAAAGAAAAGCCAGATCTTCACTACTTATGCTGATAACCAACCT 40445 Query 552429 GCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT 552488 | ||| ||||||| | | |||||| |||||| ||| ||||| |||||||| | | Sbjct 40446 GGTGTGTTAATTCAAGTGTATGAAGGTGAAAGAGCATTAACTAAGGATAATAACTTATTA 40505 Query 552489 GGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTT 552548 |||| ||| |||| || ||||| || ||||| | ||| || |||||||||||| Sbjct 40506 GGTAAATTTCATTTGGATGGTATCCCATTAGCTCCAAGAAAAGTTCCACAAATTGAAGTT 40565 Query 552549 ACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATCTA 552603 ||||| ||||| ||||| || || ||||||||||| || ||| ||| ||||||| Sbjct 40566 ACTTTTGATATTGATGCTAACGGTATTTTGAATGTTACAGCTGTTGAGAAATCTA 40620 Score = 269 bits (298), Expect = 2e-66 Identities = 394/547 (72%), Gaps = 19/547 (3%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || ||||| ||||||||||| || ||| |||||||||||| ||| ||||| || Sbjct 39147 GCCATTGGTATTGATTTAGGAACTACTTATTCTTGTGTTGGTGTATGGAGAAATGAAAAT 39206 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||| || |||||||||||||| || ||| ||||||||||||||||||| |||| || Sbjct 39207 GTTGATATCATTGCCAATGATCAGGGAAACCGAACTACTCCATCTTATGTGGCTTTTACC 39266 Query 550112 GAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || ||||| | ||| | |||||||||| ||||| |||| | | | || ||| || Sbjct 39267 GACACTGAGAGATTGA-TTGGTGATGCGGCAAAGAATCAGGTTGCAAGAAACCCTGAGAA 39325 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || | ||||||||||| | || || ||||||| || | ||| | ||||||| Sbjct 39326 CACGGTGTTTGATGCTAAGAGATTGATCGGAAGAAAATTCACTGAGCAGTCTGTTCAAAG 39385 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAA---TGTTTCTGGA---AAACCTTATAT 550284 |||||||| |||||||||||| | ||| || || | ||| | ||||| || Sbjct 39386 TGATATGAAACATTGGCCTTTC---ACTGTGAAACCTGGTGCTGAAGATAAACCAATGAT 39442 Query 550285 TGAAGCTACTCATGAAGGATCTGTTAAACAAT--TTTCA-CCAGAACAAATTTCATCTAT 550341 ||| | || || | ||| | || | | ||||| |||||| | ||||||||||| Sbjct 39443 TGAGGTAACCTATCAGGGA---GAGAAGAAGTTGTTTCATCCAGAAGAGATTTCATCTAT 39499 Query 550342 GGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAG-AAGTTACGGATG 550400 |||||| |||||||||| | | || |||||| ||| |||| ||| ||| Sbjct 39500 GGTTTTGCAGAAAATGAAAGAGAATGCTGAAGCTTTT-CTGGGCAAGTCCATTAAAAATG 39558 Query 550401 CAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTG 550460 | || || || || || || || |||||||| || || | ||||| ||||| ||||||| Sbjct 39559 CTGTCATTACGGTGCCTGCTTACTTTAATGATTCCCAGAGACAAGCAACTAAGGATGCTG 39618 Query 550461 GACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTG 550520 | ||||||||| | |||||| | | ||||| ||||| || ||||||||||| ||| Sbjct 39619 GTACTATTGCTGGTTTGAATGTTATGAGAATTATTAATGAGCCAACTGCTGCTGCTATTG 39678 Query 550521 CATATGG 550527 | ||||| Sbjct 39679 CTTATGG 39685 >seq30 Length=51366 Score = 210 bits (232), Expect = 2e-48 Identities = 379/546 (69%), Gaps = 6/546 (1%) Strand=Plus/Minus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 || || || ||| | ||||| || |||||||| || ||||||| |||||||| ||| Sbjct 37741 ATTGGAATTGATCTTGGAACTACTTATAGTTGCGTGGGTGTTTTCAAAAATGGTCGAGTA 37682 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 |||||| | |||||| ||||||||| ||| ||||| || ||||||||||| | || Sbjct 37681 GAAATTCTGAACAATGAACAAGGTAACCGAATCACTCCCTCATATGTTTCTTTTGCTGAT 37622 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174 ||| ||| || || || || |||| | || ||| ||||||| || || Sbjct 37621 GGAGAAAGAAAAGTGGGAGAGGCGGCTAAATTGGAGGCTACTATAAATCCTATGAAAACA 37562 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234 || ||||| | ||| | || || ||||||| |||||||| | || | |||| Sbjct 37561 ATATTTGACGTGAAAAGGTTGATAGGAAGAAAGTTTAATGACCCAGAAGTAGAAAAAGAT 37502 Query 550235 ATGAAGCAT-TGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTAC 550293 | ||| | | ||| | ||||| ||||| ||| ||||| ||||| || | Sbjct 37501 A-GAACTTTATTGCCATATGAAATTATTAATAAAGATGGGAAACCAAATATTCGAGTGAA 37443 Query 550294 TCATGAAGGATCT-GTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGA 550352 || |||||| | || |||| |||||||||||||| ||||||| ||| | Sbjct 37442 G-ATTAAGGATAAAGATACCGTATTTGCACCAGAACAAATTAGTGCTATGGTCTTAGAAA 37384 Query 550353 AAATGAAACAAACAGC-CAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACT 550411 |||||||| | | || || | ||||| | || || ||| | |||| || | || Sbjct 37383 AAATGAAAGATATTGCTCAATCCTTTT-TGGGAAAACCAGTGAAAAATGCCGTTGTTACA 37325 Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471 || || || ||||||||||| ||||| | ||||| || ||||||||||| |||||| Sbjct 37324 GTTCCCGCTTATTTTAATGATGCACAAAGACAAGCGACCAAAGATGCTGGTACTATTGCA 37265 Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTT 550531 ||| | ||| || ||||||| || |||||||| || |||||||| || |||||||| | Sbjct 37264 GGATTAAATATTGTTCGTATCATTAATGAACCAACGGCTGCTGCTCTGGCATATGGTTTG 37205 Query 550532 GATAAA 550537 |||||| Sbjct 37204 GATAAA 37199 Score = 179 bits (198), Expect = 3e-39 Identities = 383/568 (67%), Gaps = 13/568 (2%) Strand=Plus/Minus Query 552018 GCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAA 552077 |||||||| ||||| | | |||| | |||||| |||| | |||||||| | || Sbjct 36869 GCCAAATTCGAAGAATTAAATGATGATTTATTTAGAGAAACTTTGGAACCAGTCAAGAAA 36810 Query 552078 GTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGA 552137 || ||| |||| |||| ||| ||| ||| | |||||||||| | ||||| || Sbjct 36809 GTGTTAGAAGATGCAAAATATGAAAAAGATAAAATTGATGAAATTGTTTTAGTTGGAGGT 36750 Query 552138 TCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTC-TTATTTCAATGGTAAAAAATT 552196 || ||| | ||||| ||||| | |||| ||| || ||| | || ||| | Sbjct 36749 TCCACACGCATTCCAAAAATCCAACAAATTATAAAAGAATTCTTTGGA-GGAAAAGAGCC 36691 Query 552197 AAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTAT 552256 ||| || ||||||| || || || ||||| |||||||| ||||| ||||||| ||| Sbjct 36690 AAACAGGGGTATTAATCCTGACGAAGCAGTTGCTTATGGTGCTGCAATCCAAGCAGGTAT 36631 Query 552257 TCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCT 552316 | | | ||| || || || | | | ||| | |||| ||||||||| | Sbjct 36630 TATGTTAGGA---------GAGGAATTAAACGAAGTGGTATTATTAGACGTTACTCCTTT 36580 Query 552317 ATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTAC 552376 |||| ||| | |||||||| || |||||||||||| | | || | ||||| || Sbjct 36579 GACTCTAGGTATTGAAACAGTGGGTGGTATTATGACTCAATTGATTAAAAGAAACACCGT 36520 Query 552377 TATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTAC 552436 || || |||||||| | ||||||||| ||| ||| |||||| | ||||| Sbjct 36519 CATCCCAACAAAAAAATCACAGACATTTTCTACTTATCAAGACAATCAACCAGCTGTGTT 36460 Query 552437 AATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGG-TACTT 552495 |||||| | ||||||||||||||| || || || ||||| ||| | || | || Sbjct 36459 AATTCAGGTATTTGAAGGAGAAAGAGCTTTAACAAAGGATAACCATCTTTTAGGAAAATT 36400 Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555 | |||| || |||||||| || || | | ||||| || |||||||||| || || Sbjct 36399 TGAATTGAG-TGGTATTCCCCCCGCACAAAGAGGAGTGCCCAAAATTGAAGTCACCTTTA 36341 Query 552556 ATATCGATGCCAATGGAATTTTGAATGT 552583 |||||| ||||| || || |||| Sbjct 36340 CAATCGATAAAAATGGTATATTACATGT 36313 Score = 102 bits (112), Expect = 7e-16 Identities = 236/348 (68%), Gaps = 21/348 (6%) Strand=Plus/Plus Query 361496 ATTTTATAttttttttGAAAATCAAGTATTACA-TGATTCATGATTAAATAATCTATATC 361554 || |||| ||||||||||||| || || | |||| ||| | | | ||| | ||| Sbjct 37015 ATGTTATTTTTTTTTTGAAAAGTT--TAATATAGTGATCCATAACTCTTTGATCAAAATC 37072 Query 361555 TTCACCACCTAAATGTGTA-CTACCGCTAACTGCTAATGTTCTAAATAAGCCATTATTAA 361613 ||| || ||||| |||||| || | || | || || ||| | ||||| | || Sbjct 37073 TTCTCCTCCTAAGTGTGTATCTCCAGCGGTTGCCAAAACCTCGAAAACA-CCATTGTCAA 37131 Query 361614 TATTCATGAGACAAACATCGAGTGTTCCTGCACCTAAATCATATATGATAATATTCCCCC 361673 || || | | ||||||| | ||| ||| | ||||||||||| | | |||| | Sbjct 37132 TAACCAGAATAGAAACATCAAATGTACCTCCTCCTAAATCATACACCAAAATACTA---- 37187 Query 361674 CGTTTTTATTTTTCCAAGTTTTACTTCCAAGACCATAAGCTAATGAAGCAGCTGTTGGTT 361733 |||| ||||| ||| ||||| |||||| || | | |||||| ||||||| Sbjct 37188 -GTTTCCGTTTTT-------TTA--TCCAA-ACCATATGCCAGAGCAGCAGCCGTTGGTT 37236 Query 361734 CGTTAATTATTTTAATAACATTGAGTCCCGCTATTTTTGATGCATCTAAAGTGGCTTGAC 361793 | ||||| || || || ||| | ||| || || | |||||| || ||||| | Sbjct 37237 CATTAATGATACGAACAATATTTAATCCTGCAATAGTACCAGCATCTTTGGTCGCTTGTC 37296 Query 361794 GTTGTGCATCATTAAAATATGCAGGAACAGTAATCACTGC-TTTTTCA 361840 |||||||||||||||||| || ||||| |||| || || ||||||| Sbjct 37297 TTTGTGCATCATTAAAATAAGCGGGAACTGTAACAACGGCATTTTTCA 37344 >seq439 Length=15487 Score = 143 bits (158), Expect = 2e-28 Identities = 308/452 (68%), Gaps = 10/452 (2%) Strand=Plus/Plus Query 367267 GATGGACCTCCATTTGCCACAGGTACAATGCATTATGGTCATATTTTAGTATCATCTATT 367326 ||||||||||||||||| || ||| | |||||||| ||| | |||| | | || Sbjct 4117 GATGGACCTCCATTTGCAACTGGTTTACCACATTATGGACATTTATTAGCAGGAATAATA 4176 Query 367327 AAAGACACCATAATTAGATATT-TTACCATGAAGGGTTACAAAGTTGATAGAAGAAATTC 367385 ||||| || | |||||| |||||| || ||| || || |||||| | Sbjct 4177 AAAGATTGTATTACAAGATATAATTACCAA-AATAATTATTCTGTAGAAAGAAGATTTGG 4235 Query 367386 TTGGGATTGTCATGGAGTTCCAATTGAA-ATGT--TAGCTAAA-AAAGTAATCGGATACA 367441 |||||||||||||||| | || ||||| ||| ||| ||| ||| |||| || | Sbjct 4236 TTGGGATTGTCATGGATTACCTGTTGAATATGAAATAGAAAAAGAAAATAAT---ATTAA 4292 Query 367442 CAACAAAGAAAGAATTATATGATTATGGAATTAATAATCATAATGATATTTGTCGTAATT 367501 | |||||| ||| || | | ||| | || | ||||||| | ||| | | Sbjct 4293 TAGAAAAGAAGATATTTTAAAAATGGGGA-TAGATGTTTATAATGAAAAATGTAGATCTA 4351 Query 367502 TGGTTTTAAAATGTGCTGATCGCTGGTATCAAGATTTTGAACGTATTGGAAGATGGATTG 367561 | |||||||||| | | | ||| | || ||||| | || ||||| ||||||| Sbjct 4352 TTGTTTTAAAATATTCAAAAGAATGGATTAAAACAGTTGAAAGAATAGGAAGGTGGATTG 4411 Query 367562 ACGTAAAAAATGAATATAAAACAATGGATACTAATTTCATGGAATCTGTTATTTGGGCAT 367621 | | |||||||| ||||||||||||||||| | ||| |||||| |||| |||| | Sbjct 4412 ATTTTAAAAATGATTATAAAACAATGGATACCAGTTTTATGGAAACTGTCTGGTGGGTTT 4471 Query 367622 TTAAACAATTATACGAACGCGGTATGATTTTTGAAGGTTATAAAGTAATGCCATATTCAA 367681 ||||| ||||||| || ||| | | | | || || |||||||||||||||||| Sbjct 4472 TTAAAGAATTATATGATAACGGATTAGTATATAAATCTTTTAAAGTAATGCCATATTCTT 4531 Query 367682 CTGGTTGTAATACTGCTTTGTCACATTTTGAA 367713 | |||||||| || | ||| |||||||| Sbjct 4532 GTAAATGTAATACACCTATTTCAAATTTTGAA 4563 >seq483 Length=14038 Score = 140 bits (154), Expect = 3e-27 Identities = 143/184 (78%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || |||||||||| || ||||||| |||||| | ||||||||||||||| || | |||| Sbjct 6118 ATGTTGTAATCAGATAAAGTTCTTCCATCTTCTAATTGTTTTCCGGCAAAGATTAATCTT 6059 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || ||||| || |||||||||||||| ||||| ||||| ||||| ||||| ||| Sbjct 6058 TGTTGATCTGGTGGAATTCCTTCTTTGTCTTGGATTTTGGCCTTTACATTTTCAATAGTA 5999 Query 563413 TCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 || | || ||| ||| | |||| ||||| || || | ||||||||||||||||| Sbjct 5998 TCTGATGATTCTAC-TTCCAATGTAATGGTTTTTCCCGTTAATGTTTTAACGAAAATTTG 5940 Query 563472 CATA 563475 |||| Sbjct 5939 CATA 5936 Score = 132 bits (146), Expect = 4e-25 Identities = 146/191 (76%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| || |||||||||| || ||||||| ||||| | ||||||||| ||||| || Sbjct 6351 TTTGG--ATGTTGTAATCAGATAAAGTTCTTCCGTCTTCCAATTGTTTTCCAGCAAAGAT 6294 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 | |||||| ||||| || |||||||||||||| ||||| ||||| ||||| || Sbjct 6293 TAATCTTTGTTGATCTGGTGGAATTCCTTCTTTGTCTTGGATTTTGGCCTTTACATTTTC 6234 Query 563406 AATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 ||| || || | ||| | || ||| | |||| ||||| || || | |||||||||| Sbjct 6233 AATAGTGTCTG-ATGATTCCACTTCCAATGTAATGGTTTTTCCCGTTAATGTTTTAACGA 6175 Query 563465 AAATTTGCATA 563475 ||||||||||| Sbjct 6174 AAATTTGCATA 6164 Score = 109 bits (120), Expect = 4e-18 Identities = 136/184 (74%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || || ||||| || ||||||| ||||| | ||||||||| ||||| || | |||| Sbjct 5890 ATGTTATAATCCAATAAAGTTCTTCCGTCTTCCAATTGTTTTCCAGCAAAGATTAATCTT 5831 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || ||||| || |||||||||||||| ||||| ||||| || || ||||| || Sbjct 5830 TGTTGATCTGGTGGAATTCCTTCTTTGTCTTGGATTTTGGCCTTCACATTTTCAATAGTG 5771 Query 563413 TCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 || | ||| | || ||| | |||| ||||| ||||| | || ||||||||||| || Sbjct 5770 TCTG-ATGATTCCACTTCCAAGGTAATGGTTTTTCCAGTTAAGGTCTTAACGAAAATCTG 5712 Query 563472 CATA 563475 |||| Sbjct 5711 CATA 5708 Score = 102 bits (112), Expect = 7e-16 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || |||||||||| || ||||||| ||||| | ||||||||| ||||| || | |||| Sbjct 5662 ATGTTGTAATCAGATAAAGTTCTTCCGTCTTCCAATTGTTTTCCAGCAAAGATTAATCTT 5603 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || ||||| || |||||||||||||| ||||| ||||| || || |||||| || Sbjct 5602 TGTTGATCTGGTGGAATTCCTTCTTTGTCTTGGATTTTGGCCTTCACATTCTCAATAGTG 5543 Query 563413 TCAG 563416 |||| Sbjct 5542 TCAG 5539 >seq3 Length=82673 Score = 125 bits (138), Expect = 6e-23 Identities = 144/190 (76%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| ||||||||||| | || |||| |||||||| | ||||||||| ||||| || Sbjct 24741 TTTGG--ATATTGTAATCCGAAAGGGTTCGGGAATCTTCCAATTGTTTTCCAGCAAATAT 24798 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 | || ||||||||||||||||| ||||| |||||||||||||| ||| || || Sbjct 24799 TAATCGCTGCTGATCAGGAGGAATGCCTTCCTTATCTTGAATTTTGGTTTTCACATTTTC 24858 Query 563406 AATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 ||| ||||| | || | || ||| || || | ||||||||| || | || || || | Sbjct 24859 AATAATATCA-TTTGGCTCCACTTCAAGGGTTATAGTTTTACCGGTTAACGTCTTCACAA 24917 Query 563465 AAATTTGCAT 563474 | |||||||| Sbjct 24918 AGATTTGCAT 24927 >seq643 Length=10438 Score = 118 bits (130), Expect = 9e-21 Identities = 344/516 (67%), Gaps = 29/516 (6%) Strand=Plus/Minus Query 428096 GAATAACCGGTTCCAATTCCTTCTGTACCATTTACAAGAATCATTGGAATGACTGGTGCA 428155 ||||| || |||||||| ||||| |||||||| ||||| ||||||| | || | Sbjct 6587 GAATACCCAGTTCCAATACCTTCACAGCCATTTACTAGAATTGTTGGAATAATAGGGATA 6528 Query 428156 TAATATTGTGGTTCAATCATTTTATTATCTTCATATTGTAAATGT---AAAATATCAAAA 428212 ||||||| |||||||| ||| ||||||| | |||||| || || | | Sbjct 6527 AAATATTGGGGTTCAATTTTTTGTCCTTCTTCATTT---AAATGTTTTAAGATGGGATCA 6471 Query 428213 TCATGCTCGATAAATAtttttttAGC--CAATTCATCAAGTTGTGTAAAGATATATCTTG 428270 || || |||| || || ||| || || | | || |||||| || || || | Sbjct 6470 TCTAATTCATTAAAGATGCTTCTAGTGGCAGTTGCTAA--TTTTGTAAAAATGTACCTGG 6413 Query 428271 C-GCT--TGCGGAATCTTTACCTCCTGACATTCTAGTTCCAAATTGTCCATTAGGCATCA 428327 | ||| |||| ||||| |||||| |||| | |||||||||||| || | Sbjct 6412 CTGCTGATGCG---TCTTTTCCTCCTTCTTTTCTGCTACCAAATTGTCCACATGGTTCTA 6356 Query 428328 ATAAATTAATATTATTACTTCCCACATAATTTTGGGCCATATTAACAATGGTACTAGT-- 428385 | || |||||||||||| || ||| | |||| ||||| |||| ||| || | || Sbjct 6355 AAAAGTTAATATTATTAGAACCAACAAATGTTTGTGCCATGTTAATAATAGT--TTGTTG 6298 Query 428386 TAAGGATTGTTCACCATGATGATATTTAGTTCTTTTTGAAACTGCACCTTGTAATTCTGA 428445 ||| || ||| ||||| |||||| | | || || || ||| ||||| || Sbjct 6297 TAATGAAGTTTCTCCATGGTGATATGCACTGTGTTCTGCAATATATCCTACTAATTGTGC 6238 Query 428446 TACCTTTATTTCTTCTTTATAAATACCTTCTTCTACTG-ATCCATAAAATACTTTGCGTT 428504 || || ||| | ||| ||| | ||||| || | ||||||| |||||||| | || Sbjct 6237 CACTTTACATTCAT-TTTTTAAGT---TTCTTTTAAAGCATCCATATAATACTTTTCTTT 6182 Query 428505 GTGATGGTTTGAATCCATCCATAATATTAGGTATAGATCTTAAATTATCATCCACTGAGA 428564 || |||||| |||| |||||||| || || ||| |||| | |||| | ||| Sbjct 6181 GTCCTGGTTTCCATCCGTCCATAATGTTTGGAATACTTCTTTCTGTGTCAT--ATCTAGA 6124 Query 428565 ATGAT--ATTAGTTCTTGATGAATGAAATCATAATA 428598 || || |||| ||||| || | ||||||||||| Sbjct 6123 ATAATAAATTAATTCTTTATTTACAAAATCATAATA 6088 >seq256 Length=22220 Score = 107 bits (118), Expect = 2e-17 Identities = 349/528 (66%), Gaps = 52/528 (10%) Strand=Plus/Plus Query 1047047 TTGCTGATTGGTTTGCACAAATGAATCATAAAATGGGAGGTGATTTAGAAAAAATTAGAG 1047106 |||| ||||||||||| ||| ||||| ||||| || ||||| |||||||| || Sbjct 21013 TTGCCGATTGGTTTGCTCAATTGAATAATAAATTGTCTTCAAATTTAAAAAAAATTCGAA 21072 Query 1047107 ATGTGGGTAAATATTTCATTGAAGTATTTAAAGCATGTGGTATTAATATGTCTGGCAC-- 1047164 | ||||| ||||||| || ||||| | ||||| ||||| || |||||| | || Sbjct 21073 AGATGGGTGAATATTTTATAGAAGTGTGGAAAGCTTGTGGAATGAATATG----GAACAT 21128 Query 1047165 --TAAATTTATCTGGGCTAGTGAATTTTTTAATGATAATGCTACAAAATATT-----TTG 1047217 | |||| | ||||| ||||| | ||| | || | |||||| ||| Sbjct 21129 GTTCAATTCCTTTGGGCAAGTGAGGAAATCAATAAAAAACCAGACGAATATTGGTCTTTG 21188 Query 1047218 --AAAGAATGTTACATATTGCTAATCAGACATCTTTAGCACGTGCTAAAAGATGTTGTCA 1047275 || | |||| | | || ||| |||| | | | | ||| |||||| | Sbjct 21189 GTAATGGATGTATCTAGGTCCT--TCA-ACATTACTCGAATG----AAACGATGTTTAAA 21241 Query 1047276 AATTATGGGACGTAGAGAAGG-TGATGA--ATTATCTTCGTCACAAATTATATATCCTTG 1047332 ||| |||||| | | | || | ||| || ||||| | ||||||||| |||| || || Sbjct 21242 AATAATGGGAAG-ACATAATGATGAAGAGAATTATTGT--TCACAAATTTTATACCCATG 21298 Query 1047333 TATGCAAGTAGCAGATATTTTTGAATTAAATCCAAATGGAATTGATATTTGTCAACTTGG 1047392 ||||||| || ||||| ||| ||||| | | || ||||||||| | || Sbjct 21299 TATGCAATGTGCTGATATATTTTTTTTAAA---------AGTGGACATTTGTCAATTGGG 21349 Query 1047393 TGTTGATCAAAGAAAAGTTAATATGTTAGCCATTGAATATGCTAAACGTAATAATTTAAA 1047452 | ||||||||||| |||||||||||||| | |||||| | | || || |||| Sbjct 21350 TACGGATCAAAGAAAGGTTAATATGTTAGCAAGAGAATATTGTGATTTAAAAAAAATAAA 21409 Query 1047453 -AAC--ACCAATTATTTTATCTCACCATATGTTAATGGGATTG---AAAGGTTCCAAAAA 1047506 ||| ||| |||||||||| || | |||||| |||||| |||| ||| || Sbjct 21410 GAACAAACCTGTTATTTTATCACATGAAATGTTACCTGGATTGTTAGAAGG--ACAAGAA 21467 Query 1047507 TAAAATGAGTAAATCTGATCCTGAAAAT---GCCATATTTATGGAAGA 1047551 |||||| ||||| || || |||| || || |||||||| || Sbjct 21468 -AAAATGTCAAAATCGGA---TGTAAATTCCGCAATTTTTATGGACGA 21511 >seq67 Length=41086 Score = 93.3 bits (102), Expect = 3e-13 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 399566 ATAATA--TGACAAGGAGGTAATGCCAtttttttAATGTCGACAGGATTCCATAAACTTA 399623 |||||| ||||| ||||||||||||||||||| | || |||||||||| || || Sbjct 28743 ATAATACATGACAGGGAGGTAATGCCATTTTTTCTAAATCTTTAGGATTCCATGCACATA 28684 Query 399624 TAATTATTCTGCGATCATTTGGATTATTCATAATAGCATCAATACAATTATTTAATTGAT 399683 || ||||| | || || |||| ||| |||| |||||| ||| |||||||||| Sbjct 28683 ATATAATTCTTCTATTCTTAGGATCATTTTTAATTAAATCAATTACATTTTTTAATTGAT 28624 Query 399684 CAATTCCTTGATCATGATAATCTGTTTTACA-ATTATCATATTTGGCTCCGAAATGTCTC 399742 ||| |||| || |||||| | | || || ||||| || || ||||||||| Sbjct 28623 CAACACCTTTATTTGTATAATC-ATCATGCATGTTCGTATATTCTGCACCAAAATGTCTC 28565 Query 399743 ATTTGAAATCCATA 399756 ||||||||||| Sbjct 28564 CACTGAAATCCATA 28551 >seq76 Length=37600 Score = 89.7 bits (98), Expect = 4e-12 Identities = 304/469 (65%), Gaps = 11/469 (2%) Strand=Plus/Minus Query 552301 TAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTA 552360 |||| |||| ||| |||| | ||| | ||||| | ||||| | | || || | | Sbjct 13557 TAGACGTTATTCCATTATCATTGGGTATTGAAACGTTGGGAGGAGTATTTACGAAATTGA 13498 Query 552361 TCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATA 552420 | |||||||||| |||||||| || ||||||| | ||||| || | | || | Sbjct 13497 TTAATAGAAATACGACTATTCCAACAAAGAAATCTCAAATTTTTTCCACTGCTGCTGACA 13438 Query 552421 ATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATA 552480 | ||||| || | ||| || | || ||||||||||| | | | || || | Sbjct 13437 ACCAAACACAAGTAAGTATTAAAGTGTTCCAAGGAGAAAGAGAGATGGCATGTGACAACA 13378 Query 552481 ATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAA 552540 | ||| ||| |||| |||| | || ||||| || || || | |||||||| || | Sbjct 13377 AATTACTAGGTTCTTTCGATTTGGTTGGAATTCCACCAGCACCAAGAGGAGTACCACAGA 13318 Query 552541 TTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAAT 552600 ||||||| ||||| ||| | ||||| || | || | || | | ||| ||| ||| Sbjct 13317 TTGAAGTAACTTTTGATGTAGATGCTAACGCCATCATTAACATTTCGGCTATTGACAAAA 13258 Query 552601 CTAGCAACAAGAGTAAAAATATTACTNNNNNNNATAATCGTGGTAGATTTACTGATGAAC 552660 | |||||||| | | ||||| | | | ||||| |||| | | | ||| Sbjct 13257 TGACCAACAAGAAACAGCAGATTAC---AATTCAAAGTAGTGGTGGATTAAGTAAAGAAG 13201 Query 552661 AAATTAAACGTATGGTCGAAGAAGCTAAA--GAATTTGAAGAAGCTGAT-AATAAGAGAA 552717 ||||| || ||||| ||||||| || ||| | |||| ||| || || |||| Sbjct 13200 AAATTGAAAAGATGGTACAAGAAGCGGAATTGAA--TAGAGAAAAGGATCAACAAAAGAA 13143 Query 552718 -AATCTGCTGTCGATGCCAAGAATGATTTAGAAAATTATATTCACAGTG 552765 ||| || ||||| || ||||| ||||| || ||| |||||| Sbjct 13142 GAATTTG--ACAGATGCAAAAAATGAGGGAGAAACTTTAATTTACAGTG 13096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029138245506670