Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq64 228 1e-54 >seq64 Length=40286 Score = 228 bits (252), Expect = 1e-54 Identities = 551/829 (66%), Gaps = 9/829 (1%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 ||||||||| ||||||||| ||| |||||| | |||| || |||||||| ||||||| Sbjct 17118 CATAACTCCTGATTTTTGATAATCTGCAACTCTTTTTTCAAAGAAATTTGTTTTTCCTTG 17059 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGA 36991 || || ||| ||||| || |||||| || | || | | | | || Sbjct 17058 TAAAGAAATAAGATCCATCCAACTAAATGGGTTTTTGGCATGAAAAACTTTTGAGCAGCC 16999 Query 36992 TAATTCCTTCAGA-AGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGT 37050 ||| | ||| | || | ||| ||||||||||| || |||| |||||| | | | Sbjct 16998 TAAA-CATTCTAATAGTCGATCAGCAACAAATTCAATATATTGTGACATTAATCTGGAAT 16940 Query 37051 TTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAG 37110 | || ||||| || | ||| | || || | |||| | |||||| ||||| Sbjct 16939 TCATTCCAATAAGATCACATGGTAATGATTCGCAGATAAATGATCTTTCTACATCTACAG 16880 Query 37111 CATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACA 37170 | ||||||||||||||| | |||| ||| | | || || ||| | || ||| Sbjct 16879 CTTCTTTAACTATATTATGTACTACTTTTTCGGGTAATTTATTTTCTAATAAACTATACA 16820 Query 37171 ATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGG 37230 |||||| |||||| || || |||||||||||||| |||||||||||| ||| | Sbjct 16819 TTAAACAATTAAAATCTGTGTGCAATCCTTCATCTCTACTGATCAATTCATTACTAAAAG 16760 Query 37231 TTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAA 37290 | | ||| ||||| | |||||| | ||| || ||||| |||| |||| || Sbjct 16759 TGAGTCCATGCATTTTGTTTTGTTTTTTGAACCAGAAGATTGCACAAAAACTTCCACTAA 16700 Query 37291 AGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAAT 37350 | | |||||||||||| ||| || |||| | | | | |||| | | | Sbjct 16699 ATAGAATACCTTCAACACAAGCATTGGCAACAATTCTTTCAGCAAAAG---AGTTCGTGT 16643 Query 37351 CAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTG 37410 || ||||||||| || ||| ||| || ||| ||| || ||||||| | Sbjct 16642 CATTAATCCATTTAGCTGCCCATAATGCTTTGTTTTTTACAGCAGGTATATTTTCAATAG 16583 Query 37411 CTTTTAAGAGAAAGtt--tttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACT 37468 | | || | || || | |||| | |||| | |||||| ||||||| | ||||| Sbjct 16582 CATGAAATA--AATTTAATCTTTCAGCTTCATCTTTAATATAATTATCAATCAACAAACT 16525 Query 37469 ATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTC 37528 || |||| || || |||||||| | ||||||||||||| |||||| | ||||| Sbjct 16524 GTAAGTTTCTGAATGGATATTTTCTACAGCTATCTGAAAAGAATAAAACTTTTTTGCTTC 16465 Query 37529 AGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACT 37588 || | ||| || || | |||||| | || ||| ||||| || || |||||||| Sbjct 16464 AGCAATTTGTACTTCTCTCAAAAACTTACAAGATAAATTTTCTAACACAATTCCATCACT 16405 Query 37589 AGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTT 37648 ||||||||| || || | |||| ||||| |||||| | |||| | | ||| ||| Sbjct 16404 AGCTGCAAAAAATGCCAACACATGGTTTATGAAATGTTTCTCATTGTCTTTTAAAGTTTC 16345 Query 37649 CCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAA 37697 |||| || | ||| | || ||||||| ||| ||| | ||||||||| Sbjct 16344 ATAATCTTTTAAATCACTAGACAAATCAATTTCTTCAGCAGTCCAAAAA 16296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592294713987320