Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq67 87.8 4e-12 >seq67 Length=41086 Score = 87.8 bits (96), Expect = 4e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 133895 ATTGATGGATTGAAAAATAATCCTGATTCTCGACGTCATATTCTAACTGCATGGAATGTT 133954 |||||| | | |||||| ||||| | | || | ||| || |||||||||| | Sbjct 28641 ATTGATTTAATTAAAAATGATCCTAAGAATAGAAGAATTATATTATGTGCATGGAATCCT 28700 Query 133955 GGTGAACTAGATAAAATGACTTTGCCACCATGTCATTGCTTTAGTCAATTCTTCGTAAAT 134014 || |||| |||||| | || || || |||||| || |||| || | | | Sbjct 28701 AAAGATTTAGAAAAAATGGCATTACCTCCCTGTCATGTATTATGTCAGTTTTATATTTTT 28760 Query 134015 GACGGTAAGTTATCATGTATTCTATATCAACGTAGCTGTGATCTATTCTTAGGAGTACCA 134074 || ||| || || ||||| | |||||| | |||||| | |||||||||||| Sbjct 28761 GAAAATAAATTGTCCTGTATAATGTATCAAAGATCTTGTGATTTGGGCTTAGGAGTACCT 28820 Query 134075 TTCAACATTGCTTCATATTCATTACTAACTCATATGTTAGCACAAGTTTGT 134125 || ||||||||||| ||||| | | ||||| ||| |||| ||||||||| Sbjct 28821 TTTAACATTGCTTCCTATTCTATTTTTACTCACATGATAGCCCAAGTTTGT 28871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147546539453534