Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq444 214 5e-50 seq166 141 3e-28 seq101 138 3e-27 seq2 95.1 4e-14 >seq444 Length=15175 Score = 214 bits (236), Expect = 5e-50 Identities = 802/1236 (65%), Gaps = 30/1236 (2%) Strand=Plus/Plus Query 155312 TTCCAGAGCCGCAAAATAAATTGTCTCAAAGATATATTTATTGACTGTTTTAGCCTCCTC 155371 ||||| ||| |||||||| || || ||||| || ||| || | | ||| || || || Sbjct 4935 TTCCAAAGCTGCAAAATACATAGTTTCAAAAATTCTTTTGTTCAATTCTTTGGCATCGTC 4994 Query 155372 AGATGTAAATGCGATATC-CATCTTGAAAAATGTGTCGGCTAAACCCTGAACTCCAATAC 155430 ||| | ||| |||||| || | || ||||| || || || ||||| ||||| | Sbjct 4995 CGATTCATATG-GATATCTCAATAACATGAAGGTGTCAGCCAATCCTTGAACACCAATTC 5053 Query 155431 CGACTGGGCGATGCCTGTAATT-GCTCCTGCTTGTCTTCTTGTT-TGGGTAAAAATTCAC 155488 | | ||| | ||| | | ||| | || ||| |||||| ||| ||| |||| Sbjct 5054 CAATTGGTCTATGTCGATGATTTGAAACT--TTGGCTTCTTTAACTGGATAATAATTTCT 5111 Query 155489 ATCAATAATGTTATTTAAATTT---GTAACCAATACCTTGGTTACGTCTGCTAATTTCAC 155545 || || || |||| ||||||| |||| ||| | |||| | || | ||| Sbjct 5112 TTCTATTATTTTATCTAAATTTCTTGTAAT-AATTC--TGGTAATATCATAAAGTTTTTT 5168 Query 155546 ATAGTCAAATG---TTTTATCCTCATTTACAAACATACCAAGACCAATAGACGCCAGATT 155602 | |||||| |||| ||| || |||||| ||| | ||||||| || | ||| Sbjct 5169 GAAATCAAATTGTCTTTTTTCCATATCTACAAATTTACATAAGGCAATAGAAGCTAAATT 5228 Query 155603 ACATACCGC-AGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAGCACAGGTTAGAAC 155661 || || || | | || || | | | ||||||||||| || ||||| | || || Sbjct 5229 GCAAACGGCTACTTCCCCTGGAGATG-TATATTCTACAATTTCGCAGCATAAATTGCTAC 5287 Query 155662 TCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCCTTGTATAGAA 155721 || || || || || || | || || ||||| |||||||||||| || |||| | Sbjct 5288 ATTTAATAGTTCCCAAGTTTTGTTGATTGGATTTGGAGTTACAAGCATCTTTATATAACA 5347 Query 155722 TGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCAT 155781 | |||||||||||||| || || || | | ||| | ||| | || | || Sbjct 5348 TATATGGGGTTCCTGTTTCTATTTGACTTTGTAAAATGGCAAACCATAAATCTTGAGCTG 5407 Query 155782 -TAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACAGCGTTCGGTAATCC 155840 || | | ||| || | ||||| |||||||| | || | || | || Sbjct 5408 GTACTGTTCTTTTTCCTAAT-CCTTCTTCTTCATATTTTGTGTATAATTTTTCAAATTCT 5466 Query 155841 TCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACAGCGACCAAATTTTA 155900 || || | ||||||| ||||| || | | || || | | | ||| |||| Sbjct 5467 TCTCCCCAGGTTTCACTCAAACCAGGACATTCGTTAGGACACATTAAAGTCCATTCTTTA 5526 Query 155901 TTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTT 155960 || | |||| | | |||||| | |||| ||| | |||||| || | || ||| Sbjct 5527 TTTTCTTTTACTCTTTTCATAAAGAGATCAGGAATCCAGAGAGCATAAAATAAATCTCTT 5586 Query 155961 GCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGA 156020 || || | || || | ||||| || || | | ||||| ||||| | ||| | | Sbjct 5587 GCTCTTAATTCTTCTTTTCCGTGGTTTTTTCTCAAATCTAAAAATTCAAATACATCTGAA 5646 Query 156021 TGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTGCCACCC---TGATCTACA 156077 || || || | ||| || |||||| ||| || || || || ||| ||||||||| Sbjct 5647 TGCCACGGTTCAATATAAATTGCAAAAGAACCTTTTCTTTTTCCGCCCCCTTGATCTACA 5706 Query 156078 TACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTG 156137 || | |||||| | ||| || || | || |||||| |||| ||||||||| | || ||| Sbjct 5707 TATCTAGCAGTGTCATTAAACACTCTTAACATAGGTATAAGCCCATTGGAATTTCCGTTG 5766 Query 156138 GTTCCGCGAATATGCGAACCAGATGAGCGA--ACATTATGAATATGTAGTCCAATACCAC 156195 ||||| | ||| | ||| ||| | |||| || | || |||||||| | Sbjct 5767 GTTCCTCTAATGTAAGAATTT--TGACCTCTTACATCTTGCACTGCTACACCAATACCTC 5824 Query 156196 CTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAAT 156255 ||| ||| ||| | || |||| ||||| ||| | |||||||||||||| |||| Sbjct 5825 CTGCTGTTTTGCTAATCAGTGCACATTGCTTTAAAGTTTCAAAAATACCTTCAATGGAAT 5884 Query 156256 CATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGA 156315 | | || || | || | |||| ||| | ||| |||| ||| ||||| | ||||| Sbjct 5885 CGGACTGAATGGACAATAAAAAGCAAGAAGACATTTGTGGTCTTGGAGTTCCGGAGTTGA 5944 Query 156316 ATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAA 156375 | | || || || ||||| ||||||| || | ||||| ||| ||||| ||| || Sbjct 5945 ACAAAGTCGGAGTAGCATGGGTAAAATATTTTTGGGACATCAAATGATATGTTTCC--AA 6002 Query 156376 T-CT-TCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGG 156433 | || | |||| || | |||||||| ||||| || |||||| ||| ||| || || Sbjct 6003 TGCTCTATCAACATCATCAATGTGAATACCAATAGAAACTCTCATCAACAAATGTTGTGG 6062 Query 156434 ACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCC 156493 | |||||| || || |||||| | | || | | ||| | |||||| || || Sbjct 6063 TCTCTCTACTATTTTGTTATTAATTCGTAACAAATAAGATCTTTCTAAAGTTTTGAAACC 6122 Query 156494 GAAATAATCAAACAGAAAATCACGGTTGTAATCAAT 156529 ||||||||| | |||||| | | |||||||||| Sbjct 6123 AAAATAATCATAATTAAAATCTCTGCTGTAATCAAT 6158 >seq166 Length=28060 Score = 141 bits (156), Expect = 3e-28 Identities = 310/455 (68%), Gaps = 11/455 (2%) Strand=Plus/Minus Query 288853 TCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCC 288912 ||||| || |||| | || | |||||| ||||| ||||| |||| |||||| | || Sbjct 25123 TCAAATCTTCCAGGCCTCGTAATTGCTGGATCTAAAATATCTACTCTATTTGTTCCCGCT 25064 Query 288913 AATACAACAA---TA-GATTCGGTTTGC-TTAAATCCATCCATACTTGTTAAAATTTGAT 288967 || ||||||| || |||| |||| || || |||||||| ||| || |||| Sbjct 25063 AAAACAACAACTTTATGATTA--TTTGTATTGAACCCATCCATTTCGACTAACATCTGAT 25006 Query 288968 TAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACC-CGAATCGCTCCttttt 289026 | | || | || ||||||||||| |||| | | ||| | | | || ||| Sbjct 25005 TTAAAGTATTCTCTCTTTCATCATTGCCTCCTCCCGCAAAACCTCCTTTTGATCTTTTCC 24946 Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086 || || |||||||| |||||||| || ||||| | | | || | || || ||| || | Sbjct 24945 TT-CCTACAGCATCTATTTCGTCTATAAAAATAATAGAAGGTGCATATTTTCTTGCTTGT 24887 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 ||||||||||||||||| | || | ||||| |||||| | | ||| | ||| ||| Sbjct 24886 GCAAATAATTCTCTTACTCTAGAAGGTCCAATTCCAACAAATACTTCAATAAAATCACTT 24827 Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206 || | | || |||| ||||||||||||||||||||||| | || | | || Sbjct 24826 CCGCTAATATTAAAAAATGGAACATTTGCTTCGCCTGCTACTGCTTTTGCTAATAAAGTT 24767 Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGAC 289266 || ||||| || || | || |||| | ||||||| || | ||||| || ||| Sbjct 24766 TTTCCTGTACCTGGAGCACCACACAATAAAGCTCCCTTAGGAATCTTTGCACC-TAAGAT 24708 Query 289267 TT-ATATTTCTCAGGGCTCTTTAAAAATTCTACAA 289300 || |||||| || | |||||||| || |||| Sbjct 24707 TTCATATTTTGTTGGATTTTTTAAAAAGTCAACAA 24673 >seq101 Length=34459 Score = 138 bits (152), Expect = 3e-27 Identities = 237/340 (70%), Gaps = 8/340 (2%) Strand=Plus/Plus Query 289017 GCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTG 289076 ||| |||||| || ||||||||||||||||||||||| | | |||||| | || || Sbjct 11939 GCTTCTTTTTGACCCCACAGCATCAATTTCGTCAATGAATACAATACACGGTGCATGTT- 11997 Query 289077 TCT----CGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTT 289132 ||| ||| ||| ||||||||||| || | ||| |||| || ||| |||||| Sbjct 11998 TCTTAGCCGC--TTG-AAATAATTCTCGTATTCTTCTTGCACCAACCCCCACAAACATTT 12054 Query 289133 CTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCC 289192 || ||||||| || | ||| |||| | || | ||||||||||| || || | ||||| Sbjct 12055 CTTCAAATTCGGATCCAGATGCTTGTAAAAAAGGAACATTTGCTTCTCCAGCAATTGCCC 12114 Query 289193 TCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTT 289252 | || | ||| || || ||||| || ||| |||| | | || || ||||| | || Sbjct 12115 TTGCTATAAGAGTTTTTCCTGTACCCGGTTCTCCCGACAGCAAAATCCCTTTTGGCAATT 12174 Query 289253 TTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTT 289312 |||| ||| ||||||| |||| | |||||| | |||| ||||| | | | Sbjct 12175 TTGCTCCAATTTTTGTATATTTTTCAGAATTTTTTAAATAATCTATTATTTCTTGTAACT 12234 Query 289313 CATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGT 289352 | | || | |||||||||||| |||||| ||||| Sbjct 12235 CTTCCTTCACTTCATCACATCCTTTCACATCACTGAAAGT 12274 >seq2 Length=99635 Score = 95.1 bits (104), Expect = 4e-14 Identities = 71/82 (87%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 408942 AAGTTCTATTAACTCAGTTGGTTAGAGTGTCGGTCTTATGAGCCGAAAGTCGTGGGTTCG 409001 ||| || |||| |||||| |||||||| ||||||||||||||||||| |||||||||||| Sbjct 51702 AAGATCCATTAGCTCAGT-GGTTAGAGCGTCGGTCTTATGAGCCGAATGTCGTGGGTTCG 51644 Query 409002 AGTCCCACATAGAACAtttttt 409023 | ||||||| || ||| |||| Sbjct 51643 ATCCCCACATGGATCATATTTT 51622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471761347591271