Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq3 118 8e-22 seq483 84.2 2e-11 >seq3 Length=82673 Score = 118 bits (130), Expect = 8e-22 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 ||||||||||| ||||| || || ||||| || ||||| || ||| | ||| |||| | Sbjct 24930 AAAATGCAAATCTTTGTGAAGACGTTAACCGGTAAAACTATAACCCTTGAAGTGGAGCCA 24871 Query 107613 GGCGATACTGTCGGCCAGGT-AAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGA 107671 |||| | | | | || ||||| ||| ||| ||||| |||||| | || || Sbjct 24870 AATGATATTATTGAAAATGTGAAAACCAAA-ATTCAAGATAAGGAAGGCATTCCTCCTGA 24812 Query 107672 TCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTA 107731 ||||||| || | || | ||| || ||||| |||| || || ||| | |||| || Sbjct 24811 TCAGCAGCGATTAATATTTGCTGGAAAACAATTGGAAGATTCCCGAACCCTTTCGGATTA 24752 Query 107732 CAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGA 107783 ||| || ||||| || |||||||||||| | || |||||||| ||||| ||| Sbjct 24751 CAATATCCAAAAAGAATCTACGTTGCACTTAGTTTTGAGATTACGAGGAGGA 24700 >seq483 Length=14038 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| || ||||| ||||| || ||||||||||| | ||| ||| | Sbjct 6165 ATGCAAATTTTCGTTAAAACATTAACGGGAAAAACCATTACATTGGAAGTGGAATCATCA 6224 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| | | | ||||| || || || |||||||| | || ||||| Sbjct 6225 GACACTATTGAAAATGTAAAGGCCAAAATCCAAGACAAAGAAGGAATTCCACCAGATCAA 6284 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | || | ||| || ||||| |||| |||| | ||| | | || |||||| Sbjct 6285 CAAAGATTAATCTTTGCTGGAAAACAATTGGAAGACGGAAGAACTTTATCTGATTACAAC 6344 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 || ||||| || || || || ||| | || || ||||| |||| |||| Sbjct 6345 ATCCAAAAAGAATCCACCTTACACTTAGTTTTAAGATTAAGAGGAGGAA 6393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398862298709287