Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq58 93.3 5e-14 >seq58 Length=43011 Score = 93.3 bits (102), Expect = 5e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 193019 TGGTATTAATGCTATTGTTGCTATAGCTTGCTATACTGGTTATAATCAAGAAGACAGTAT 193078 ||| |||||||| |||||||| || || ||||| |||||||||||||| |||||| | Sbjct 6357 TGGAATTAATGCGATTGTTGCAATTATGTGTTATACGGGTTATAATCAAGAGGACAGTTT 6298 Query 193079 TATTTTAAATAAAGCTTCTATTGAAAGAGGATTATTTGGTACTATAACTTATAATACATA 193138 ||| | ||| || |||||||||| | ||||||||| | | | | || | || || Sbjct 6297 GATTATGAATCAATCTTCTATTGATCGTGGATTATTTCGAAGTGTTTTTTTCAGAACGTA 6238 Query 193139 TACAGTTGAAGAAA 193152 |||| |||||||| Sbjct 6237 TACAAGTGAAGAAA 6224 Score = 89.7 bits (98), Expect = 7e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 193794 ATTTTTATAGGGCCAACTTATTATCATCGTCTTAAACATATGGTTAAGGATAAAATGCAT 193853 |||||||| || || ||||||||||| | | || |||||||| | ||||| || ||| Sbjct 4994 ATTTTTATTGGACCTACTTATTATCAGAGATTAAAGCATATGGTGGAAGATAAGATACAT 4935 Query 193854 GCTAGAAGTCATGGACAAGTGACTACTTTACATCGACAACCAAATTGTGGTCGTTCTCAA 193913 || |||||| |||| | |||| || ||||||||| || | || | Sbjct 4934 GCAAGAAGTAGAGGACCTTTAACTATGATAACGAGACAACCAACAGAAGGAAGATCAAGA 4875 Query 193914 GGTGGAGGTTTAAGATTTGGAGAAATGGAGAAAGACTGTATTTTAGTTCATGGTGCTACT 193973 | ||| |||||| ||||||| |||||||| | ||| ||||| || |||||| || | Sbjct 4874 GATGGTGGTTTACGATTTGGTGAAATGGAAAGAGATTGTATGATATCTCATGGAGCAGCA 4815 Query 193974 CAATTCTTGAATGAAAGAATGTTT 193997 || | ||||| ||| | ||||| Sbjct 4814 AAAATGTTGAAAGAACGTTTGTTT 4791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635153915815240