Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq483 129 1e-24 >seq483 Length=14038 Score = 129 bits (142), Expect = 1e-24 Identities = 149/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || |||||||| || || |||||||| ||| || || || | ||| Sbjct 5952 AAAACATTAACGGGAAAAACCATTACATTGGAAGTAGAATCATCAGATACTATTGAAAAT 6011 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| || || ||||| |||||||||||| || || |||||| | ||||| Sbjct 6012 GTAAAGGCCAAAATCCAAGACAAAGAAGGAATTCCACCAGATCAACAAAGATTAATCTTT 6071 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 |||||||| || || ||||||||||| ||||| | ||||||||| |||||||||| || Sbjct 6072 GCCGGAAAACAATTAGAAGATGGAAGAACTTTATCTGATTACAACATCCAGAAAGAATCC 6131 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 || | ||| | ||||| ||| Sbjct 6132 ACCTTACACTTAGTTTTAAGA 6152 Score = 129 bits (142), Expect = 1e-24 Identities = 149/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || |||||||| || || |||||||||||| || ||||| | ||| Sbjct 6180 AAAACATTAACGGGAAAAACCATTACATTGGAAGTGGAATCATCAGACACTATTGAAAAT 6239 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| || || ||||| |||||||||||| || || |||||| | ||||| Sbjct 6240 GTAAAGGCCAAAATCCAAGACAAAGAAGGAATTCCACCAGATCAACAAAGATTAATCTTT 6299 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || ||||| || |||||||| ||||| ||||| | ||||||||| |||| ||||| || Sbjct 6300 GCTGGAAAACAATTGGAAGACGGAAGAACTTTATCTGATTACAACATCCAAAAAGAATCC 6359 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 || | ||| | ||||| ||| Sbjct 6360 ACCTTACACTTAGTTTTAAGA 6380 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || |||||||| || || |||||||||||| || ||||| | ||| || ||| Sbjct 5733 ACTGGAAAAACCATTACCTTGGAAGTGGAATCATCAGACACTATTGAAAATGTGAAGGCC 5792 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 || || ||||| |||||||||||| || || |||||| | ||||| || ||||| Sbjct 5793 AAAATCCAAGACAAAGAAGGAATTCCACCAGATCAACAAAGATTAATCTTTGCTGGAAAA 5852 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || |||||||| ||||| ||||| ||||| ||| |||||||||| || ||| | ||| Sbjct 5853 CAATTGGAAGACGGAAGAACTTTATTGGATTATAACATCCAGAAAGAATCCACTTTACAC 5912 Query 206374 CTTGTTTTGAGA 206385 | ||||| ||| Sbjct 5913 TTAGTTTTAAGA 5924 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 206195 CAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAA 206254 |||| || || || || |||||||| || |||||||| | || || ||| | Sbjct 5506 CAGGTAAGACTATTACCTTGGAAGTTGAGGCATCTGACACTATTGAGAATGTGAAGGCCA 5565 Query 206255 AGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGC 206314 | || ||||| |||||||||||| || || |||||| | ||||| || ||||| | Sbjct 5566 AAATCCAAGACAAAGAAGGAATTCCACCAGATCAACAAAGATTAATCTTTGCTGGAAAAC 5625 Query 206315 AGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACC 206374 | |||||||| ||||| ||||| | ||||||||| |||||||||| || || | ||| Sbjct 5626 AATTGGAAGACGGAAGAACTTTATCTGATTACAACATCCAGAAAGAATCCACCTTACACT 5685 Query 206375 TTGTTTTGAGA 206385 | ||||| ||| Sbjct 5686 TAGTTTTAAGA 5696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181775631178343