Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq444 394 1e-104 seq64 259 7e-64 >seq444 Length=15175 Score = 394 bits (436), Expect = 1e-104 Identities = 1125/1715 (66%), Gaps = 36/1715 (2%) Strand=Plus/Plus Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCC 68574 ||||| || || |||||||||||||| ||||| | |||||| | ||||| |||||| Sbjct 4444 TGATCAATAAATGCTCCTCTATCTGCAGCCATATCAATAATATTTTTTTGTTTTATTTCC 4503 Query 68575 CAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGG---CTCGTATTTTGAATGGAT 68631 || | ||| || | | | || | |||||| || | || ||| |||| | Sbjct 4504 CAGACAGTTTTGTACAATTCCTTTAAATCATCAGGTATTTCACTGATATACTGAACACTT 4563 Query 68632 CCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAA 68691 ||| | | || | | | || || || |||| ||| | ||| || |||| Sbjct 4564 CCATTGTGAGCAATCAGTTGTTGTTTCATATCTTCATCCCATAGACCTCTATCAAATAAA 4623 Query 68692 ACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAA 68751 || | | ||||| ||||| |||| ||||| ||| ||| ||||| | ||| Sbjct 4624 TCTTTCAACAGATGTGGATTTACTACAAAGAATTCTCCACTTAATACTCTTCTGTAATAA 4683 Query 68752 ATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCA 68811 || || || || |||||||| | ||||||||||||||| | |||||| | || || || Sbjct 4684 ATGTTGCTAGTGTATGGTTCAAAAGATTCATTATTTCCTAAAATTTGTGATGTAGAAGCC 4743 Query 68812 GTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTT 68871 || |||||||| || | |||||| |||||| | ||||||| | || ||||| | |||| Sbjct 4744 GTAGGCATAGGAGCTAATAATAAAGAATTTCTTAAACCATGTTTGATTATTTTTTGTTTT 4803 Query 68872 AGATGTTTCCAATCCCAAAGATCAGATGGTACA---ACATTCCAAAGATCGTATTGTAGA 68928 | | | ||| | |||| | | ||| |||||||| | || | || | | Sbjct 4804 AATTCATCCCAGTTCCAATATTTATTATCTACTTTTACATTCCACATGTCAAACTGCAAA 4863 Query 68929 ATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGT 68988 || || || ||||| ||| ||| |||||||||| | ||| | | ||| | | Sbjct 4864 ATACCTTTGCTTGCTGGGCTTCCTTTAAATGTTTCATAGGTTCCATGAACCTTAGCCAAT 4923 Query 68989 TC-ACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATC 69047 || || || | || || || | |||| || ||||| ||||| | || || | || Sbjct 4924 TCTACGGATT-CTTCCAAAGCTGCAAAATACATAGTTTCAAAAATTCTTTTGTTCAATTC 4982 Query 69048 TTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTG 69107 || || || || ||||||| || | || || | || |||||||| || Sbjct 4983 TTTGGCATCGTCCGATTCATATGGATATCTCAATAACATGAAGGTGTCAGCCAATCCTTG 5042 Query 69108 AACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATA 69167 ||| ||||| || || |||||||||| | ||||||| || |||||| || ||||| Sbjct 5043 AACACCAATTCCAATTGGTCTATGTCGATGATTTGAAACTTTGGCTTCTTTAACTGGATA 5102 Query 69168 ATAATTAATATCTATAATTTTATTAAGATTTC--GGACTACTACTTTAACCACGTCCTTT 69225 |||||| | ||||| ||||||| | ||||| | | || | || | | || | Sbjct 5103 ATAATTTCTTTCTATTATTTTATCTAAATTTCTTGTAATAATTCTGGTAATA--TCATAA 5160 Query 69226 AGTTTGAGAAAATCAAATCGTCCATCT---ATA---ACAAACATATTCAGTGCTACAGAT 69279 ||||| ||||||||| ||| | | ||| ||||| || | || | ||| Sbjct 5161 AGTTTTTTGAAATCAAATTGTCTTTTTTCCATATCTACAAATTTACATAAGGCAATAGAA 5220 Query 69280 GCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGA 69339 |||| ||| ||||| ||||| || | | || ||||| || || || |||| | Sbjct 5221 GCTAAATTGCAAACGGCTACTTCCCCTGGAGATGTATATTCTACAATTTCGCAGCATAAA 5280 Query 69340 TTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTG 69399 || |||||||| ||||| |||| ||||| ||||| || |||||| || || || Sbjct 5281 TTGCTACATTTAATAGTTCCCAAGTTTTGTTGATTGGATTTGGAGTTACAAGCATCTTTA 5340 Query 69400 TAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACC 69459 || | ||| | || || || ||||| || ||| || | ||| | ||| | | Sbjct 5341 TATAACATATATGGGGTTCCTGTTTCTATTTGACTTTGTAAAATGGCAAACCATAAATCT 5400 Query 69460 CTAGCATTTATTACGGTCTTGTAACGCTTC--TCTTTTTCATATTGTGTATATAGCCGTT 69517 ||| || | | |||| | | || |||| |||||||| ||| |||| || Sbjct 5401 TGAGCTGGTACT--GTTCTTTTTCCTAATCCTTCTTCTTCATATTTTGTGTATAATTTTT 5458 Query 69518 CGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACC 69577 | ||||| |||||||| ||| ||| ||||||||||| || |||||||| || | || Sbjct 5459 CAAATTCTTCTCCCCAGGTTTCACTCAAACCAGGACATTCGTTAGGACACATTAAAGTCC 5518 Query 69578 ACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGA 69637 | | | || || || |||| ||||||||| ||||| |||||||| ||||| ||| | Sbjct 5519 ATTCTTTATTTTCTTTTACTCTTTTCATAAAGAGATCAGGAATCCAGAGAGCATAAAATA 5578 Query 69638 GATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAA 69697 |||||| | ||| |||||| ||||| |||||| | | ||| | ||| || | | Sbjct 5579 AATCTCTTGCTCTTAATTCTTCTTTTCCGTGGTTTTTTCTCAAATCTAAAAATTCAAATA 5638 Query 69698 TATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCT 69757 ||| |||||||| ||||| | ||| || || | || || ||| || || | Sbjct 5639 CATCTGAATGCCACGGTTCAATATAAATTGCAAAAGAACCTTTTCTTTTTCCGCCCCCTT 5698 Query 69758 GATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATT 69817 |||||| ||||| ||||||| |||| | ||||| | ||| || |||| ||||| || | Sbjct 5699 GATCTACATATCTAGCAGTGTCATTAAACACTCTTAACATAGGTATAAGCCCATTGGAAT 5758 Query 69818 TACCATTTGTTCCAGAAATATA--ACTT----CCTCTTGCGCGAATATTACTAATAGATA 69871 | || || ||||| ||| || | || |||||| | || || | | | || Sbjct 5759 TTCCGTTGGTTCCTCTAATGTAAGAATTTTGACCTCTTAC----ATCTTGC--ACTGCTA 5812 Query 69872 GACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATAC 69931 ||| || |||||||| |||| || || ||||| | || || || ||| | |||| Sbjct 5813 CACCAATACCTCCTGCTGTTTTGCTAATCAGTGCACATTGCTTTAAAGTTTCAAAAATAC 5872 Query 69932 CCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAG 69991 | || ||| ||| ||| | | ||| || ||||||||| | | || Sbjct 5873 CTTCAATGGAATCGGACTGAATGGACAATAAAAAGCAAGAAGACATTTGTGGTCTTGGAG 5932 Query 69992 TTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGT 70051 |||| | || || || || |||| || || || || |||||| || | || || | Sbjct 5933 TTCCGGAGTTGAACAAAGTCGGAGTAGCATGGGTAAAATATTTTTGGGACATCAAATGAT 5992 Query 70052 ATGTTTCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAAC 70110 ||||||| | ||| || | ||| || || ||||| || || | || | ||||||| Sbjct 5993 ATGTTTCCAATGCTCTATCAACATCATCAATG-TGAATACCAATAGAAACTCTCATCAAC 6051 Query 70111 ATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGA 70170 | ||| || |||| ||||| |||| ||||| ||| |||| || ||| |||| | | Sbjct 6052 AAATGTTGTGGTCTCTCTACTATTTTGTTATTAATTCGTAACAAATAAGATCTTTCTAAA 6111 Query 70171 GTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCT 70205 ||||| || |||||||| | || ||| ||||| Sbjct 6112 GTTTTGAAACCAAAATAATCATAATTAAAATCTCT 6146 >seq64 Length=40286 Score = 259 bits (286), Expect = 7e-64 Identities = 580/860 (67%), Gaps = 22/860 (3%) Strand=Plus/Minus Query 39307 TTGTGACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTT 39366 ||||| ||||||||| |||||| || || |||| | ||| || || ||||| ||||| Sbjct 17124 TTGTGCCATAACTCCTGATTTTTGATAATCTGCAACTCTTTTTTCAAAGAAATTTGTTTT 17065 Query 39367 GCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAttttttttt 39426 |||| || || ||| ||||| || ||| || || | |||| | | |||| Sbjct 17064 TCCTTGTAAAGAAATAAGATCCATCCAACTAAATGGGTTTTTGGCATGAAAAACTTTTGA 17005 Query 39427 AAATCCTAA---TTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCAT 39483 | ||||| |||| ||| | || ||| ||||||||||| || ||| | ||| | Sbjct 17004 GCAGCCTAAACATTCT--AAT-AGTCGATCAGCAACAAATTCAATATATTGTGACATTAA 16948 Query 39484 TTCACAATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGAT 39543 | |||||||||| || || | | ||||| | || | ||| | |||| | Sbjct 16947 TCTGGAATTCATTCCAATAAGATCACATGGTAATGATTCGCAGATAAATGATCTTTCTAC 16888 Query 39544 GTCTACGGCCTCTGTTATTATCG-ATGTTACTACCTCATCACTCGGTGGATGC---AATA 39599 ||||| || ||| | | ||| |||| ||||| | || | || |||| Sbjct 16887 ATCTACAGCTTCTTTAACTATATTATGT-ACTACTTTTTCGGGTAATTTATTTTCTAATA 16829 Query 39600 AATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATT 39659 || || ||||||| || || || || | || ||||||||||| || |||| Sbjct 16828 AAC---TATACATTAAACAATTAAAATCTGTGTGCAATCCTTCATCTCTACTGATCAATT 16772 Query 39660 CGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAA 39719 | ||| ||| ||||||||| ||||| | ||||||| ||| || || ||| || Sbjct 16771 CATTACTAAAAGTGAGTCCATGCATTTTGTTTTGTTTTTTGAACCAGAAGATTGCACAAA 16712 Query 39720 AAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAAC 39779 || |||| ||| | || ||||| || ||| ||||||| ||| || | || Sbjct 16711 AACTTCCACTAAATAGAATACCTTCAACACAAGCATTGGCAACAATTCTTTCAGCAAAAG 16652 Query 39780 ---TTGTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCA 39836 | || |||||| ||||| || |||||| ||||| || |||||| ||| | Sbjct 16651 AGTTCGTGTCATTA---ATCCATTTAGCTGCCCATAATGCTTTGTTTTTTACAGCAGGTA 16595 Query 39837 TTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTA 39896 | |||| ||||||| ||| | || | ||||| | |||||||| ||| |||| | Sbjct 16594 TATTTTCAATAGCATGAAATAAATTTAATCTTTCAGCTTCATCTTTAATATAATTATCAA 16535 Query 39897 TTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAAC 39956 | |||| ||| || ||||||||||||| ||||| | || |||||||| ||||| Sbjct 16534 TCAACAAACTGTAAGTTTCTGAATGGATATTTTCTACAGCTATCTGAAAAGAATAAAACT 16475 Query 39957 ATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTC-CGCCAAATTTTCATTCACT 40015 | ||||||||| ||||||||| ||| ||||| ||| | | |||||||| ||| Sbjct 16474 TTTTTGCTTCAGCAATTTGTACTTCT-CTCAAAAACTTACAAGATAAATTTTCTAACACA 16416 Query 40016 ATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGT 40075 |||||||||||||| |||||||||||||| ||||| || || |||| ||| |||| | | Sbjct 16415 ATTCCATCACTAGCTGCAAAAAATGCCAACACATGGTTTATGAAATGTTTCTCATTGTCT 16356 Query 40076 GTCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAAC 40135 | || | | | || || | ||| | || | ||| | ||||||||| |||||||| Sbjct 16355 TTTAAAGTTTCATAATCTTTTAAATCACTAGACAAATCAATTTCTTCAGCAGTCCAAAAA 16296 Query 40136 GACGCCTCTGCCTTTTTGTA 40155 || || ||||| ||||| || Sbjct 16295 GAAGCTTCTGCTTTTTTATA 16276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686883186888120