Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq3 156 5e-33 seq483 95.1 1e-14 >seq3 Length=82673 Score = 156 bits (172), Expect = 5e-33 Identities = 163/214 (76%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||||||||| |||||| | ||||| || ||||| || ||||| || ||| || Sbjct 24928 AATGCAAATCTTTGTGAAGACGTTAACCGGTAAAACTATAACCCTTGAAGTGGAGCCAAA 24869 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| |||| |||| |||| | |||||||| || ||||| || |||||||| || || Sbjct 24868 TGATATTATTGAAAATGTGAAAACCAAAATTCAAGATAAGGAAGGCATTCCTCCTGATCA 24809 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||| |||| |||||||| || ||| | || ||| || ||||| | || || || Sbjct 24808 GCAGCGATTAATATTTGCTGGAAAACAATTGGAAGATTCCCGAACCCTTTCGGATTACAA 24749 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | ||||||| ||||| || | || |||| ||| Sbjct 24748 TATCCAAAAAGAATCTACGTTGCACTTAGTTTTG 24715 >seq483 Length=14038 Score = 95.1 bits (104), Expect = 1e-14 Identities = 123/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 27433 GGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAA 27492 || ||||||||||| | || |||||| || ||| | |||| ||| ||||||| ||| Sbjct 5508 GGTAAGACTATTACCTTGGAAGTTGAGGCATCTGACACTATTGAGAATGTGAAGGCCAAA 5567 Query 27493 ATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAA 27552 || || ||||| || |||||||| ||||| || || | |||| |||||||| || ||| Sbjct 5568 ATCCAAGACAAAGAAGGAATTCCACCAGATCAACAAAGATTAATCTTTGCTGGAAAACAA 5627 Query 27553 CTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCAC 27602 | || || | | || || | || || || |||| || |||||||| Sbjct 5628 TTGGAAGACGGAAGAACTTTATCTGATTACAACATCCAGAAAGAATCCAC 5677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570289134550960