Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq3 123 2e-23 seq483 98.7 6e-16 >seq3 Length=82673 Score = 123 bits (136), Expect = 2e-23 Identities = 146/195 (75%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 || ||||| || || ||||| ||||| ||||| ||||| | |||||| || |||||| Sbjct 24737 TCTTTTTGGATATTGTAATCCGAAAGGGTTCGGGAATCTTCCAATTGTTTTCCAGCAAAT 24796 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 ||||| ||||| || || || || | || ||||| ||| ||| ||| ||||| || | Sbjct 24797 ATTAATCGCTGCTGATCAGGAGGAATGCCTTCCTTATCT-TGAATTTTGGTTTTCACATT 24855 Query 34636 AA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 ||| | || | ||||||||| | |||||| ||||||||||||||||| ||||| Sbjct 24856 TTCAATAATATCATTTGGCTCCACTTCAAGGGTTATAGTTTTACCGGTTAACGTCTTCAC 24915 Query 34695 AAAAATCTGCATGTT 34709 ||| || ||||| || Sbjct 24916 AAAGATTTGCATTTT 24930 >seq483 Length=14038 Score = 98.7 bits (108), Expect = 6e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 34495 AACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCT 34554 || || || || | |||| || || || ||||||||||| | | |||| ||||| Sbjct 5920 AAAACTAAGTGTAAAGTGGATTCTTTCTGGATGTTATAATCCAATAAAGTTCTTCCGTCT 5861 Query 34555 TCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCT 34614 || | |||||| || ||||| ||||| | ||||| || || || | ||| || |||||| Sbjct 5860 TCCAATTGTTTTCCAGCAAAGATTAATCTTTGTTGATCTGGTGGAATTCCTTCTTTGTCT 5801 Query 34615 GTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGT 34673 ||| ||| | || || | ||| |||||| |||||||||| ||| || || Sbjct 5800 TGGAT-TTTGGCCTTCACATTTTCAATAGTGTCTGATGATTCCACTTCCAAGGTAATGGT 5742 Query 34674 TTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| || ||||| || || || ||||||||||| Sbjct 5741 TTTTCCAGTTAAGGTCTTAACGAAAATCTGCAT 5709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314718157907039