Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq444 401 9e-107 seq64 187 3e-42 >seq444 Length=15175 Score = 401 bits (444), Expect = 9e-107 Identities = 1134/1717 (66%), Gaps = 40/1717 (2%) Strand=Plus/Plus Query 76923 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 76982 ||||| || || ||||||||||| || ||||| | ||||| | ||||| |||||| Sbjct 4444 TGATCAATAAATGCTCCTCTATCTGCAGCCATATCAATAATATTTTTTTGTTTTATTTCC 4503 Query 76983 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGGTT--TG-TATTTTGAATGGAA 77039 || | ||||||| | | || || | |||||| || | | || ||| |||| | Sbjct 4504 CAGACAGTTTTGTACAATTCCTTTAAATCATCAGGTATTTCACTGATATACTGAAC---A 4560 Query 77040 CCACCATC-TGAT--ATAATTGTATTCTTT-ATATCATCATTCCACAATTTCCTCTCTGT 77095 | |||| ||| || | | | || ||| ||||| |||| ||| | || || Sbjct 4561 CTTCCATTGTGAGCAATCAGT-TGTTGTTTCATATCTTCATCCCATAGACCTCTATCAAA 4619 Query 77096 TAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGT 77155 |||| || | | ||||| ||||| |||| ||||||||| |||||||| | Sbjct 4620 TAAATCTTTCAACAGATGTGGATTTACTACAAAGAATTCTCCACTTAATACTCTTCTGTA 4679 Query 77156 GTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGA 77215 ||||| || || || |||||||| | ||||||||| ||||| |||||||| | ||||| Sbjct 4680 ATAAATGTTGCTAGTGTATGGTTCAAAAGATTCATTATTTCCTAAAATTTGTGATGTAGA 4739 Query 77216 AGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATC 77275 ||| || |||||||| || | |||||| |||||| | ||||||| | | ||||| | Sbjct 4740 AGCCGTAGGCATAGGAGCTAATAATAAAGAATTTCTTAAACCATGTTTGATTATTTTTTG 4799 Query 77276 TTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACA---ACATCCCAAAGATCGTATTG 77332 ||||| | | ||| | |||| | | ||| |||| ||| | || | || Sbjct 4800 TTTTAATTCATCCCAGTTCCAATATTTATTATCTACTTTTACATTCCACATGTCAAACTG 4859 Query 77333 TAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGC 77392 | ||| || || || || ||| ||| |||||||||| | ||| | | ||| Sbjct 4860 CAAAATACCTTTGCTTGCTGGGCTTCCTTTAAATGTTTCATAGGTTCCATGAACCTTAGC 4919 Query 77393 TAGTTC-ACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGA 77451 | ||| || | ||||||| ||| | |||| || ||||| ||||| | || || | Sbjct 4920 CAATTCTACGGATT-CTTCCAAAGCTGCAAAATACATAGTTTCAAAAATTCTTTTGTTCA 4978 Query 77452 GATCTTGTGCTTCAATACTAT-CAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAAT 77510 |||| || || | | || || | ||||| || | || |||| || || ||| Sbjct 4979 ATTCTTTGGCATCG-TCCGATTCATATGGATATCTCAATAACATGAAGGTGTCAGCCAAT 5037 Query 77511 CCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATA 77570 || ||||| ||||| ||||| |||||||||| | ||| |||| ||| |||||| || Sbjct 5038 CCTTGAACACCAATTCCAATTGGTCTATGTCGATGATTTGAAACTTTGGCTTCTTTAACT 5097 Query 77571 GGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCC 77630 ||||||||||| | ||||| ||||||| | |||||| || | | | | || Sbjct 5098 GGATAATAATTTCTTTCTATTATTTTATCTAAATTTCTTGTAATAATTCTGGTAATATCA 5157 Query 77631 TTTAGTTTAAGAAAATCAAAT---CTTCCATCTATAACAA-ACATGTTCAAA--GCTATA 77684 | ||||| ||||||||| ||| || ||| | | | || | || | || ||| Sbjct 5158 TAAAGTTTTTTGAAATCAAATTGTCTTTTTTCCATATCTACAAATTTACATAAGGCAATA 5217 Query 77685 GATGCTAGATTACAAACTGCTACCTCAT-TAGCGTTGGCATATTGTATTATCTCGGTACA 77743 || |||| ||| ||||| ||||| || | | | || ||||| || || ||| || Sbjct 5218 GAAGCTAAATTGCAAACGGCTACTTCCCCTGGAGATGT-ATATTCTACAATTTCGCAGCA 5276 Query 77744 TAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTC 77803 || ||| |||||||| ||||| |||| |||||||| ||| || || || | || Sbjct 5277 TAAATTGCTACATTTAATAGTTCCCAAGTTTTGTTGATTGGATTTGGAGTTACAAGCATC 5336 Query 77804 CTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGAC 77863 ||||| | ||| | || || || ||||| || || || | ||| | ||| | Sbjct 5337 TTTATATAACATATATGGGGTTCCTGTTTCTATTTGACTTTGTAAAATGGCAAACCATAA 5396 Query 77864 GACTCTAGCTTTTATCATAGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCG 77923 || |||| || | ||| | | ||| |||||||| || |||| Sbjct 5397 ATCTTGAGCTGGTACTGTTCTTTTTCCTAATCCTTCTTCTTCATATTTTGTGTATAATTT 5456 Query 77924 TTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGA 77983 ||||||||| |||||||| ||| ||| ||||| ||||| || || ||||| || | Sbjct 5457 TTCAAATTCTTCTCCCCAGGTTTCACTCAAACCAGGACATTCGTTAGGACACATTAAAGT 5516 Query 77984 CCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 78043 ||| || || ||| || |||| |||||||||||||||||| ||||| |||||| ||| Sbjct 5517 CCATTCTTTATTTTCTTTTACTCTTTTCATAAAGAGATCAGGAATCCAGAGAGCATAAAA 5576 Query 78044 TAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCAT 78103 || ||||| | ||| |||||| ||||| || ||| | | ||| | ||| || | Sbjct 5577 TAAATCTCTTGCTCTTAATTCTTCTTTTCCGTGGTTTTTTCTCAAATCTAAAAATTCAAA 5636 Query 78104 AATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCC 78163 | ||| |||||||| ||||| | ||| ||||| | | || || ||| || || Sbjct 5637 TACATCTGAATGCCACGGTTCAATATAAATTGCAAAAGAACCTTTTCTTTTTCCGCCCCC 5696 Query 78164 CTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGA 78223 ||||||| |||||| || |||| |||| | ||||| ||||| || |||| || || || Sbjct 5697 TTGATCTACATATCTAGCAGTGTCATTAAACACTCTTAACATAGGTATAAGCCCATTGGA 5756 Query 78224 TGTTCCATTTGTTCCAGAAATATA--ACTT----CCACTTGCGCGAATATTACTAATGGA 78277 |||| || ||||| ||| || | || || ||| | || || | | | Sbjct 5757 ATTTCCGTTGGTTCCTCTAATGTAAGAATTTTGACCTCTTAC----ATCTTGC--ACTGC 5810 Query 78278 TATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGAT 78337 || || || |||||||| | || || || || || | || || || || | || Sbjct 5811 TACACCAATACCTCCTGCTGTTTTGCTAATCAGTGCACATTGCTTTAAAGTTTCAAAAAT 5870 Query 78338 ACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAAC 78397 ||| || || || | ||| | | ||| || ||||||||| | Sbjct 5871 ACCTTCAATGGAATCGGACTGAATGGACAATAAAAAGCAAGAAGACATTTGTGGTCTTGG 5930 Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457 |||||| | || || || ||||||| ||||| ||||| |||||| || | | || Sbjct 5931 AGTTCCGGAGTTGAACAAAGTCGGAGTAGCATGGGTAAAATATTTTTGGGACATCAAATG 5990 Query 78458 GTATGTTTCAATAGCTGATTCTATGTC-CCATTGATGAATTCCTACCGCTACACGCATCA 78516 |||||||| | ||| || | || || || ||||| || | | || | ||||| Sbjct 5991 ATATGTTTCCAATGCTCTATCAACATCATCAATG-TGAATACCAATAGAAACTCTCATCA 6049 Query 78517 ACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCA 78576 ||| ||| || ||||| || || | || ||||| ||| ||||| || ||| |||| | Sbjct 6050 ACAAATGTTGTGGTCTCTCTACTATTTTGTTATTAATTCGTAACAAATAAGATCTTTCTA 6109 Query 78577 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCT 78613 ||||||| ||||||||||| | || ||| ||||| Sbjct 6110 AAGTTTTGAAACCAAAATAATCATAATTAAAATCTCT 6146 >seq64 Length=40286 Score = 187 bits (206), Expect = 3e-42 Identities = 579/877 (66%), Gaps = 38/877 (4%) Strand=Plus/Minus Query 47831 TTGAGACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTT 47890 ||| | ||||||||| ||||||||| || | || | ||| || || ||||| ||||| Sbjct 17124 TTGTGCCATAACTCCTGATTTTTGATAATCTGCAACTCTTTTTTCAAAGAAATTTGTTTT 17065 Query 47891 GCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAttttttt 47950 |||| || || ||| ||||| || |||||| || |||| | ||| |||| Sbjct 17064 TCCTTGTAAAGAAATAAGATCCATCCAACTAAATGGGTTTTTGGCATGAAAAACTTTTGA 17005 Query 47951 AAATCCTAA---TTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCAT 48007 | ||||| |||| ||| |||| ||| ||||| ||||| |||||| | ||| | Sbjct 17004 GCAGCCTAAACATTCT--AAT-AGTCGATCAGCAACAAATTCAATATATTGTGACATTAA 16948 Query 48008 TTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGAT 48067 | |||||||||| ||||| | | ||||| | || | ||| | ||| | Sbjct 16947 TCTGGAATTCATTCCAATAAGATCACATGGTAATGATTCGCAGATAAATGATCTTTCTAC 16888 Query 48068 AGTGACAGCATCC---ACTATTATCGATGT--TACCGTTTCC--TCACTTGGTGGATACA 48120 | ||||| || ||||| | |||| ||| |||| | | || | || Sbjct 16887 ATCTACAGCTTCTTTAACTATATT--ATGTACTACTTTTTCGGGTAATTTATTTTCTA-- 16832 Query 48121 ACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTA 48180 | ||| || |||||||||| |||||| || | |||||||||||||| || | Sbjct 16831 ATAAAC---TATACATTAAACAATTAAAATCTGTGTGCAATCCTTCATCTCTACTGATCA 16775 Query 48181 ATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCG 48240 |||| ||| ||| ||||| || ||||| ||||||||| ||| || ||||| Sbjct 16774 ATTCATTACTAAAAGTGAGTCCATGCATTTTGTTTTGTTTTTTGAACCAGAAGATTGCAC 16715 Query 48241 CGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGT 48300 ||| |||| ||| | || ||||| || ||| || || ||| || | Sbjct 16714 AAAAACTTCCACTAAATAGAATACCTTCAACACAAGCATTGGCAACAATTCTTTCAGCAA 16655 Query 48301 AACTGGCTTCGTTGTGT--ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGG 48358 || | ||||| | ||||| |||||| || || || |||||| ||| Sbjct 16654 AAGAG--TTCGTGTCATTAATCCATTTAGCTGCCCATAATGCTTTGTTTTTTACAGCAGG 16597 Query 48359 CATTGTTTCTATAGCATTAAAGAGAAAGtt--tttttCATTGCT--ATCTTTAACGTAAG 48414 || |||| ||||||| ||| | || || | ||||| ||| |||||||| ||| Sbjct 16596 TATATTTTCAATAGCATGAAATA--AATTTAATCTTTCA--GCTTCATCTTTAATATAAT 16541 Query 48415 TATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGT 48474 |||| || || | ||| || |||| || || |||||||| | || |||||||| | Sbjct 16540 TATCAATCAACAAACTGTAAGTTTCTGAATGGATATTTTCTACAGCTATCTGAAAAGAAT 16481 Query 48475 AAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCA-GCCAAATTCTCA 48533 |||| | | ||||| | || ||||| || | ||||| | | || | ||||| || Sbjct 16480 AAAACTTTTTTGCTTCAGCAATTTGTACTTCTCT-CAAAAACTTACAAGATAAATTTTCT 16422 Query 48534 TTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCG 48593 || |||||||||||||| ||||||||||| || ||||| || || |||| ||| || Sbjct 16421 AACACAATTCCATCACTAGCTGCAAAAAATGCCAACACATGGTTTATGAAATGTTTCTCA 16362 Query 48594 TTGGAAGT--CAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTG 48651 ||| | ||||| | | || || | ||| | || | ||| | ||||||||| | Sbjct 16361 TTGTCTTTTAAAGTTTCAT--AATCTTTTAAATCACTAGACAAATCAATTTCTTCAGCAG 16304 Query 48652 TCCAAAATGATGCCTCTGCTTTTTTATACATATTCCA 48688 ||||||| || || |||||||||||||| | || ||| Sbjct 16303 TCCAAAAAGAAGCTTCTGCTTTTTTATAAAAATCCCA 16267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694642897537120