Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq444 419 3e-112 seq64 217 2e-51 >seq444 Length=15175 Score = 419 bits (464), Expect = 3e-112 Identities = 1136/1716 (66%), Gaps = 38/1716 (2%) Strand=Plus/Plus Query 75518 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 75577 ||||| || || ||||||||||| || ||||| | ||||| | ||||| |||||| Sbjct 4444 TGATCAATAAATGCTCCTCTATCTGCAGCCATATCAATAATATTTTTTTGTTTTATTTCC 4503 Query 75578 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGATT--TG-TATTTTGAATGGAT 75634 || | ||||||| | | || || | |||||| || | | || ||| |||| | Sbjct 4504 CAGACAGTTTTGTACAATTCCTTTAAATCATCAGGTATTTCACTGATATACTGAACACTT 4563 Query 75635 CCGCCATCAGATATAA-TTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAA 75693 || | || || | |||| | || || || |||| ||| | ||| || ||| Sbjct 4564 CCATTGTGAGCAATCAGTTGTTGT-TTCATATCTTCATCCCATAGACCTCTATCAAATAA 4622 Query 75694 AACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTA 75753 | || | | ||||| ||||| || | ||||||||| |||||||||| || Sbjct 4623 ATCTTTCAACAGATGTGGATTTACTACAAAGAATTCTCCACTTAATACTCTTCTGTAATA 4682 Query 75754 AATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGC 75813 ||| || || || |||||||| | ||||||||| ||||| |||||||| | || ||||| Sbjct 4683 AATGTTGCTAGTGTATGGTTCAAAAGATTCATTATTTCCTAAAATTTGTGATGTAGAAGC 4742 Query 75814 AGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTT 75873 || |||||||| || | |||||| |||||| | ||||||| | | ||||| | ||| Sbjct 4743 CGTAGGCATAGGAGCTAATAATAAAGAATTTCTTAAACCATGTTTGATTATTTTTTGTTT 4802 Query 75874 TAGATATTTCCAATCCCAA-AGATCTGATGGTACA---ACATCCCAGAGATCGTATTGTA 75929 || | | ||| | |||| | | | || ||| |||| ||| | || | || | Sbjct 4803 TAATTCATCCCAGTTCCAATATTTATTATC-TACTTTTACATTCCACATGTCAAACTGCA 4861 Query 75930 GAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGT---CCTTTTCAG 75986 ||| || ||||| || ||| ||| ||||||| || || || | |||| || Sbjct 4862 AAATACCTTTGCTTGCTGGGCTTCCTTTAAATGTTTCATAGGTTCCATGAACCTT---AG 4918 Query 75987 CTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAA 76046 | | ||| | || || || | |||| || ||||| ||||| | || || | Sbjct 4919 CCAATTCTACGGATTCTTCCAAAGCTGCAAAATACATAGTTTCAAAAATTCTTTTGTTCA 4978 Query 76047 GATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTC 76106 |||| || || ||| | ||||| || | || || | || || | || Sbjct 4979 ATTCTTTGGCATCGTCCGATTCATATGGATATCTCAATAACATGAAGGTGTCAGCCAATC 5038 Query 76107 CCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAG 76166 | ||||| ||||| ||||| |||||||||| | ||| |||| || |||||| || | Sbjct 5039 CTTGAACACCAATTCCAATTGGTCTATGTCGATGATTTGAAACTTTGGCTTCTTTAACTG 5098 Query 76167 GGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCT 76226 | |||||||| | ||||| ||||||| | |||||| || | | | | || | Sbjct 5099 GATAATAATTTCTTTCTATTATTTTATCTAAATTTCTTGTAATAATTCTGGTAATATCAT 5158 Query 76227 TTAGTTTGAGAAAATCAAATT-------TTCCATCTATCACAAACATAT-TAAGAGCTAT 76278 ||||| |||||||||| |||||| | | ||||| || |||| || || Sbjct 5159 AAAGTTTTTTGAAATCAAATTGTCTTTTTTCCATATCT-ACAAATTTACATAAG-GCAAT 5216 Query 76279 AGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCA 76338 ||| |||| ||| ||||||||||| || | | | ||||| || || || ||| Sbjct 5217 AGAAGCTAAATTGCAAACGGCTACTTCCCCTGGAGATGTATATTCTACAATTTCGCAGCA 5276 Query 76339 TAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTC 76398 || ||| ||||| || |||||||| | |||||||| ||| || |||||| | || Sbjct 5277 TAAATTGCTACATTTAATAGTTCCCAAGTTTTGTTGATTGGATTTGGAGTTACAAGCATC 5336 Query 76399 CTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGAC 76458 ||||| | | | | || ||||| ||||| || || || | ||| | ||| | Sbjct 5337 TTTATATAACATATATGGGGTTCCTGTTTCTATTTGACTTTGTAAAATGGCAAACCATAA 5396 Query 76459 GACTCTAGCTTTTATTATAGATTTG--TATCGCTTCTCTCTTTCATATTGTGTATATAAC 76516 || |||| || | | ||| || ||||| |||| |||||| ||| ||||| Sbjct 5397 ATCTTGAGCTGGTACTGTTCTTTTTCCTAATCCTTCT-TCTT-CATATTTTGTGTATAAT 5454 Query 76517 CGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAAT 76576 ||||||||| |||||||| ||| ||||||||||||||| || |||||||| || Sbjct 5455 TTTTCAAATTCTTCTCCCCAGGTTTCACTCAAACCAGGACATTCGTTAGGACACATTAAA 5514 Query 76577 GACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATA 76636 | ||| || || ||| || || | |||||||||||||||||| ||||| |||||| | Sbjct 5515 GTCCATTCTTTATTTTCTTTTACTCTTTTCATAAAGAGATCAGGAATCCAGAGAGCATAA 5574 Query 76637 AATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCC 76696 |||| ||||| | ||| |||||| ||||| || ||| | | ||||| || || Sbjct 5575 AATAAATCTCTTGCTCTTAATTCTTCTTTTCCGTGGTTTTTTCTCAAATCTAAAAATTCA 5634 Query 76697 ATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCT 76756 | | ||| |||||||| ||||| | ||| || || | | ||| || ||| || Sbjct 5635 AATACATCTGAATGCCACGGTTCAATATAAATTGCAAAAGAACCTTTTCTTTTTCCGCCC 5694 Query 76757 CCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTA 76816 || ||||||| |||||| ||||||| |||| | ||||| ||||| || |||| || || Sbjct 5695 CCTTGATCTACATATCTAGCAGTGTCATTAAACACTCTTAACATAGGTATAAGCCCATTG 5754 Query 76817 GATGTACCATTTGTTCCAGAAAT---ATAACTTCCACATGCACGAATATTACTAATAGAT 76873 || | || || ||||| ||| | || || || | | || || | | | | Sbjct 5755 GAATTTCCGTTGGTTCCTCTAATGTAAGAATTTTGACCT-CTTACATCTTGC--ACTGCT 5811 Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933 | || || |||||||| |||| || || ||||| | || || || ||| | || Sbjct 5812 ACACCAATACCTCCTGCTGTTTTGCTAATCAGTGCACATTGCTTTAAAGTTTCAAAAATA 5871 Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACA 76993 || || || ||| | ||| | | ||| || ||||||||| | | Sbjct 5872 CCTTCAATGGAATCGGACTGAATGGACAATAAAAAGCAAGAAGACATTTGTGGTCTTGGA 5931 Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 ||||| | || ||||| || |||| ||||| || || |||||| || | | || Sbjct 5932 GTTCCGGAGTTGAACAAAGTCGGAGTAGCATGGGTAAAATATTTTTGGGACATCAAATGA 5991 Query 77054 TATGTTTCAATAACTGCTTCTATATC-CCATTGATGAATTCCTACAGCGACACGCATCAA 77112 |||||||| | || || | ||| || || ||||| || | || || | |||||| Sbjct 5992 TATGTTTCCAATGCTCTATCAACATCATCAATG-TGAATACCAATAGAAACTCTCATCAA 6050 Query 77113 CATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 77172 || ||| || |||| ||||| | || ||||| ||| ||||| || ||| |||| || Sbjct 6051 CAAATGTTGTGGTCTCTCTACTATTTTGTTATTAATTCGTAACAAATAAGATCTTTCTAA 6110 Query 77173 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCT 77208 |||||| ||||||||||| | || ||| ||||| Sbjct 6111 AGTTTTGAAACCAAAATAATCATAATTAAAATCTCT 6146 >seq64 Length=40286 Score = 217 bits (240), Expect = 2e-51 Identities = 410/592 (69%), Gaps = 22/592 (4%) Strand=Plus/Minus Query 46619 TAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAG 46678 || |||||||||| |||||| || | |||||||||||||| || ||||| ||| Sbjct 16825 TATACATTAAACAATTAAAATCTGTGTGCAATCCTTCATCTCTACTGATCAATTCATTAC 16766 Query 46679 AAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATC 46738 ||| ||||| ||| ||||| | ||||||| ||| || || || ||| || Sbjct 16765 TAAAAGTGAGTCCATGCATTTTGTTTTGTTTTTTGAACCAGAAGATTGCACAAAAACTTC 16706 Query 46739 CAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAA---CTGG 46795 || ||| | || ||||| ||| || || |||| ||| || | || | | Sbjct 16705 CACTAAATAGAATACCTTCAACACAAGCATTGGCAACAATTCTTTCAGCAAAAGAGTTCG 16646 Query 46796 CATCATTATGAATCCACCTTTGAGC--CCAATCA-GCCTTTTTCTTTACACAAGGCATTG 46852 ||||| |||||| || ||| || || | || || || |||||| ||| || Sbjct 16645 TGTCATT---AATCCA---TTTAGCTGCCCATAATGCTTTGTTTTTTACAGCAGGTATAT 16592 Query 46853 TTTCTATAGCATTAAAGAGAAAGtt--tttttCATCACTATCTTTAACATATGTATCTAT 46910 |||| ||||||| || | ||| || | ||||| | |||||||| ||| |||| || Sbjct 16591 TTTCAATAGCATGAA--ATAAATTTAATCTTTCAGCTTCATCTTTAATATAATTATCAAT 16534 Query 46911 TAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACA 46970 || | ||| || |||||||||| || ||||| | ||| |||||||| ||||| Sbjct 16533 CAACAAACTGTAAGTTTCTGAATGGATATTTTCTACAGCTATCTGAAAAGAATAAAACTT 16474 Query 46971 TCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTC-AGACAAATTCTCATTCACTA 47029 | ||||||||| ||| ||||| ||| | ||||| | | | ||| ||||| || ||| | Sbjct 16473 TTTTGCTTCAGCAATTTGTACTTCTCT-CAAAAACTTACAAGATAAATTTTCTAACACAA 16415 Query 47030 TTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCG--GT 47087 ||||||||||||| |||||||||||||| ||||| || || |||| ||| |||| | | Sbjct 16414 TTCCATCACTAGCTGCAAAAAATGCCAACACATGGTTTATGAAATGTTTCTCATTGTCTT 16355 Query 47088 AGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAA 47147 ||||| | | || || | ||| | || | ||| | ||||||||| ||||| || Sbjct 16354 TTAAAGTTTCAT--AATCTTTTAAATCACTAGACAAATCAATTTCTTCAGCAGTCCAAAA 16297 Query 47148 TGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGA 47199 || || |||||||||||||| | || ||| | || ||||| |||||| Sbjct 16296 AGAAGCTTCTGCTTTTTTATAAAAATCCCAAACTTCCGGATATAAAATCGGA 16245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712907816458560