Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq64 178 1e-39 >seq64 Length=40286 Score = 178 bits (196), Expect = 1e-39 Identities = 538/830 (65%), Gaps = 11/830 (1%) Strand=Plus/Minus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264 |||||| || ||||||||| || |||| | | |||| || |||||||| || || | Sbjct 17118 CATAACTCCTGATTTTTGATAATCTGCAACTCTTTTTTCAAAGAAATTTGTTTTTCCTTG 17059 Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGA 23324 ||| || ||| ||||| || |||||| || | || | | || | || Sbjct 17058 TAAAGAAATAAGATCCATCCAACTAAATGGGTTTTTGGCATGAAAAACTTTTGAGCAGCC 16999 Query 23325 TAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTT 23384 ||| | ||| || | ||| || ||||||||||||||||| |||| || | || Sbjct 16998 TAAACATTCTAATAGTCGATCAGCAACAAATTCAATATATTGTGACATTAATCTGGAATT 16939 Query 23385 TATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGC 23444 || || || || | ||| | | || | | ||| | |||| | ||||| Sbjct 16938 CATTCCAATAAGATCACATGGTAATGATTCGCAGATAAATGATCTTTCTACATCTACAGC 16879 Query 23445 ATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAA 23504 ||||||| ||| | | | |||| ||| | || || ||| | || ||| Sbjct 16878 TTCTTTAACTATATTATGTACTACTTTTTCGGGTAATTTATTTTCTAATAAACTATACAT 16819 Query 23505 TAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGT 23564 |||||| |||||| || | |||||||| ||||| |||||||||||| ||| || Sbjct 16818 TAAACAATTAAAATCTGTGTGCAATCCTTCATCTCTACTGATCAATTCATTACTAAAAGT 16759 Query 23565 TAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAA 23624 | ||| ||||| | ||||||| | ||| || |||||| ||| ||| ||| Sbjct 16758 GAGTCCATGCATTTTGTTTTGTTTTTTGAACCAGAAGATTGCACAAAAACTTCCACTAAA 16699 Query 23625 GAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATC 23684 | |||||| |||||| ||| ||| |||| | | | |||| | || || Sbjct 16698 TAGAATACCTTCAACACAAGCATTGGCAACAATTCTTTCAGCAAAAGAG---TTCGTGTC 16642 Query 23685 AGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGC 23744 | ||||||||| || ||| || || ||||||| || ||||||| || Sbjct 16641 ATTAATCCATTTAGCTGCCCATAATGCTTTGTTTTTTACAGCAGGTATATTTTCAATAGC 16582 Query 23745 TTTTAAGAGAAAAGTTTTTTCTT----CATTATCTGTTATATATGTATCAATTAGTAAAC 23800 | || | || ||| |||| | | |||| | ||||| ||||||| | |||| Sbjct 16581 AT----GAAATAAATTTAATCTTTCAGCTTCATCTTTAATATAATTATCAATCAACAAAC 16526 Query 23801 TATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTT 23860 | || |||| ||||| |||||||| | ||| |||||||| |||||| | | |||| Sbjct 16525 TGTAAGTTTCTGAATGGATATTTTCTACAGCTATCTGAAAAGAATAAAACTTTTTTGCTT 16466 Query 23861 CAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCAC 23920 ||| | ||| || || | ||||| | || ||||||||| ||||| ||||||| Sbjct 16465 CAGCAATTTGTACTTCTCTCAAAAACTTACAAGATAAATTTTCTAACACAATTCCATCAC 16406 Query 23921 TAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTT 23980 |||| ||||| || || | |||| ||||| |||||| | |||| | ||| ||| Sbjct 16405 TAGCTGCAAAAAATGCCAACACATGGTTTATGAAATGTTTCTCATTGTCTTTTAAAGTTT 16346 Query 23981 TCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAA 24030 |||| || | ||| | || ||||||| ||| ||| | ||||||||| Sbjct 16345 CATAATCTTTTAAATCACTAGACAAATCAATTTCTTCAGCAGTCCAAAAA 16296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521468555016200