Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq67 105 9e-18 >seq67 Length=41086 Score = 105 bits (116), Expect = 9e-18 Identities = 190/275 (69%), Gaps = 2/275 (1%) Strand=Plus/Plus Query 50631 GCCTGGAATCCAACCGATATAGATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAA 50690 || |||||||| | ||| |||| ||| | |||||||| |||||||| |||||||| Sbjct 28689 GCATGGAATCCTAAAGATTTAGAAAAAATGGCATTACCTCCCTGTCATGTATTATGTCAG 28748 Query 50691 TTTTATGCCACAGACAATGTTTTATCCTGTC-AATGTTATCAAAGATCAGCTGATATGGG 50749 |||||| || ||| || |||||| ||||| |||||||||| |||| |||| Sbjct 28749 TTTTATATTTTTGAAAATAAATTGTCCTGTATAATGT-ATCAAAGATCTTGTGATTTGGG 28807 Query 50750 TTTAGGCGTTCCTTTCAACGTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGC 50809 ||||| || ||||| ||| | ||||| || || | || || | |||| || |||| Sbjct 28808 CTTAGGAGTACCTTTTAACATTGCTTCCTATTCTATTTTTACTCACATGATAGCCCAAGT 28867 Query 50810 CGTCGATATGAAACCGGGAGAATTTATTCATACGTTAGGAGACGCTCATATTTACCTCGA 50869 || | | || |||||||| |||| |||||| | || |||||||| | | Sbjct 28868 TTGTAATTTAATTCCATATGAATTTATCCATATATTAGGAAATGCACATATTTATATGAA 28927 Query 50870 TCACGTCGATGCTTTAAAGGAGCAATTGACTCGAA 50904 ||| || ||| ||||| | ||| | | ||||| Sbjct 28928 TCATGTTGATCAGTTAAAAAAACAAATTAATCGAA 28962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667050326433480