Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq14564 134 1e-26 >seq14564 Length=527 Score = 134 bits (148), Expect = 1e-26 Identities = 270/396 (68%), Gaps = 6/396 (2%) Strand=Plus/Minus Query 36592 CCATGCGCTAACGCCTGTTTGTGGTTTTTGGAGCGCCGCCCACGGATCGTGTATGGAAAC 36651 ||| ||| ||||||| |||| ||| || | ||| || |||||||||| || || || Sbjct 527 CCAGGCGGTAACGCCCTTTTGGCCTTTCTGCAACGCGGCAAACGGATCGTGGATTGACAC 468 Query 36652 TTTAAAATTGTCCCTGCCAGCGCACGATCTTTGCAACGCTTCAAAACTCCCCGTGATAGA 36711 |||||| | || | ||| ||| || | |||||||| | || || || ||| Sbjct 467 TTTAAAGTCCTCACGGCCCTGGCAGGAACGCTGCAACGCCTGGAAGCTACCTTCGATCTC 408 Query 36712 TTTTAAACTGTCGTTTATACCGTCACCGCCGCAAATCGGTATAAATCCGTATAAAATGTG 36771 ||| | ||||||||| || || |||||||| || ||||| ||||| ||||| | | || Sbjct 407 TTTCAGACTGTCGTTGATGCCATCACCGCCACAGATCGGGATAAACCCGTACAGCAAATG 348 Query 36772 CGAAAGGTTCGGCGTGGGCACTTTGTCCACGGGAAAAGATCGACCGTAAACGCCCCATTC 36831 || ||||| ||| |||| || || |||| ||| || ||||| ||||||||||| Sbjct 347 CGTCAGGTTTTGCGCCGGCAGCTTATCGACGGTGAAATTACGGCCGTATACGCCCCATTC 288 Query 36832 GACAAAATAGG--CCG-CTACGGTGTGATCAGTGTTGTACGTATACGGTTTATTGTTTTC 36888 |||||||| | ||| | || || | | |||| |||| |||||||| ||||| Sbjct 287 CACAAAATAAGAGCCGACCACTTTGCCGGAA-TCTTGTT--TATAAGGTTTATTCTTTTC 231 Query 36889 TTGCCACGTGTATTGTAACGGTTTTAAATGTTTACCATCGGTGTCTGCGATCACGACTTC 36948 | || | || ||| ||| ||||| | || ||||| || || | || | ||| Sbjct 230 CAACAGCGGTTCTTTTAAGGGTGCCAAATGGCTGCCGTCGGTATCGGCCACAACAATTTC 171 Query 36949 TACGGTTTGACTAGCCGAACAGCCGTCGGCATTGCA 36984 | | || || | ||||||||||||||| || Sbjct 170 AGTCGCATCGCTGGCGGTACAGCCGTCGGCATTACA 135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418228237433120