Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_004333.2 Length=48247 Score E Sequences producing significant alignments: (Bits) Value seq97 80.6 8e-11 >seq97 Length=8256 Score = 80.6 bits (88), Expect = 8e-11 Identities = 114/158 (72%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 45376 TACAAGCTCGCCGCGATGGACATTTACAGCATCGAATACGATGCCGTGACGAAAGACCAG 45435 |||||| |||| || | | ||||||| |||| || | || | || || ||| Sbjct 7214 TACAAGGTCGCGGCCTCGCAGATTTACAACATCCCGGTCGCAGAGGTCAGCAAGGATCAG 7273 Query 45436 CGCCAGGTCGGCAAGGCCGCAGACCTGGCACTCGGTTTCGGCGGCGGCGACGGC-GCATT 45494 |||||||||||||||| ||| | || || ||||| |||||||| |||| || | || || Sbjct 7274 CGCCAGGTCGGCAAGGTCGCCGTGCTCGCGCTCGGCTTCGGCGGTGGCG-CGTCGGCGTT 7332 Query 45495 CGCGAGCATGGCGGCCAACTACGGCGTCCACCTGCCGC 45532 ||| | ||||||| |||| ||||| ||||| ||| Sbjct 7333 CGCCAACATGGCGAAGGTCTACCGCGTCGACCTGGCGC 7370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154241575509938