Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_004775.1 Length=39671 Score E Sequences producing significant alignments: (Bits) Value seq14555 91.5 4e-14 >seq14555 Length=438 Score = 91.5 bits (100), Expect = 4e-14 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 25809 GCAATTGCCAATCTGGTGTACAGCAAGCGCATGGGAAATAACGGACCGGGCGACGGATGG 25868 || || ||||||||||| ||| | | ||| |||| || || || || ||||| ||| Sbjct 170 GCTATCGCCAATCTGGTATACGCCGATCGCCTGGGCAACAAATCACGCGGTGACGGGTGG 229 Query 25869 AATTATCGCGGTCGTGGACTTATTCAGATCACCGGCCTGAATAACTACCGCGACTGTGGC 25928 || |||||||| |||||||| |||||||| ||||| | | |||| ||||| | || || Sbjct 230 AAATATCGCGGCCGTGGACTGATTCAGATTACCGGTCAGGATAATTACCGGGCATGCGGT 289 Query 25929 AACGGCCTGAAGGTGGATCTGGT 25951 | || ||||| | || ||||| Sbjct 290 ACCGCGTTGAAGCTTGACCTGGT 312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126803218531506