Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_004812.1 Length=156789 Score E Sequences producing significant alignments: (Bits) Value seq9797 84.2 2e-11 >seq9797 Length=509 Score = 84.2 bits (92), Expect = 2e-11 Identities = 92/121 (76%), Gaps = 6/121 (5%) Strand=Plus/Minus Query 10071 CGACGAGGTACGCGTCGTCATCATCGGCCAGGACCCCTATCA---CCAGCCCGGCCAGGC 10127 ||| || || |||||||||||| |||||||||| |||||||| | || |||||||| Sbjct 196 CGAGGACGTCCGCGTCGTCATCCTCGGCCAGGATCCCTATCATGGCGAG---GGCCAGGC 140 Query 10128 CCACGGCCTGGCGTTCAGCGTGAGGCCCGGTACGCCCAccccccccAGCCTGCGCAACAT 10187 ||||| ||| ||| ||| |||| || || |||||| ||||||||| |||||| Sbjct 139 GCACGGGCTGTGCTTCTCGGTGCGGCCGGGCGTGCGCACCCCGCCCAGCCTGGTCAACAT 80 Query 10188 C 10188 | Sbjct 79 C 79 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 501503622124440