Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq14564 140 3e-28 >seq14564 Length=527 Score = 140 bits (154), Expect = 3e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 101756 GCGGCCCAAGGATCGTGGATAGCAACTTTAAAATCTGAACGGCCCTGGCAAGAACGTTGC 101815 ||||| | ||||||||||| | |||||||| || |||||||||||| ||||| ||| Sbjct 493 GCGGCAAACGGATCGTGGATTGACACTTTAAAGTCCTCACGGCCCTGGCAGGAACGCTGC 434 Query 101816 AACGCTTCAAAACTACCGGGTATGGTTTTGAGGGCGTCGTTAAGGCCATCGCCGCCACAA 101875 ||||| | || ||||| || ||| || |||||| | |||||| |||||||| Sbjct 433 AACGCCTGGAAGCTACCTTCGATCTCTTTCAGACTGTCGTTGATGCCATCACCGCCACAG 374 Query 101876 ATGGGTATGAACCCGTACAACAAATGTGAGAGGTTGGGCAGCGGCACTTTGTCCACCGGA 101935 || || || |||||||||| |||||| | ||||| || ||||| || || || | Sbjct 373 ATCGGGATAAACCCGTACAGCAAATGCGTCAGGTTTTGCGCCGGCAGCTTATCGACGGTG 314 Query 101936 AAGTTGCGACCATACACGCCCCATTCTACAAAATA 101970 || || || || || ||||||||||| |||||||| Sbjct 313 AAATTACGGCCGTATACGCCCCATTCCACAAAATA 279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419511205021941