Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq14564 93.3 4e-14 >seq14564 Length=527 Score = 93.3 bits (102), Expect = 4e-14 Identities = 179/264 (68%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 62039 AAAGTCGTTGCCGCATATTTTGTCGAATGGGGCGTTTATCCTAGAAACTTTCCTGTAGAT 62098 ||||| || | | | |||||||| ||||||||||| || | || || | || ||| Sbjct 264 AAAGTGGTCGGCTCTTATTTTGTGGAATGGGGCGTATACGGCCGTAATTTCACCGTCGAT 323 Query 62099 CGAGTGCCTACTCCTAATCTATCGCATGTTCTCTATGGATTTATTCCTATATGCGGCGGC 62158 |||| | | || || ||||| | || || || ||||| || || || ||||| Sbjct 324 AAGCTGCCGGCGCAAAACCTGACGCATTTGCTGTACGGGTTTATCCCGATCTGTGGCGGT 383 Query 62159 GACGGCATTAACGACAGTCTCAAGACCATAACCGGTAGTTTTGAAGCTCTTCAGCGGTCG 62218 || ||||| ||||||||||| || || ||||| || | || | ||||| || Sbjct 384 GATGGCATCAACGACAGTCTGAAAGAGATCGAAGGTAGCTTCCAGGCGTTGCAGCGTTCC 443 Query 62219 TGTTCGGGTCGAGACGACTTTAAAGTGTCGATTCATGACCCGTGGGCTGCCGTCCAGAAA 62278 || ||| || || |||||||||||||| || || || |||| || || | |||||| Sbjct 444 TGCCAGGGCCGTGAGGACTTTAAAGTGTCAATCCACGATCCGTTTGCCGCGTTGCAGAAA 503 Query 62279 CCACAAAAACAAGTAACCGCTTGG 62302 ||||| || ||||| ||| Sbjct 504 GGCCAAAAGGGCGTTACCGCCTGG 527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478573482475920