Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq14564 84.2 2e-11 >seq14564 Length=527 Score = 84.2 bits (92), Expect = 2e-11 Identities = 123/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 55908 CTCTACGGATTCATACCGATATGCGGCGGCGACGGCATTAACGACAGTCTCAAGACGATA 55967 || ||||| || || ||||| || ||||| || ||||| ||||||||||| || ||| Sbjct 354 CTGTACGGGTTTATCCCGATCTGTGGCGGTGATGGCATCAACGACAGTCTGAAAGAGATC 413 Query 55968 ACCGGTAGTTTTGAAGCGCTTCAGCGATCGTGTTCGGGTCGAGACGACTTCAAAGTGTCG 56027 ||||| || | ||| | ||||| || || ||| || || ||||| |||||||| Sbjct 414 GAAGGTAGCTTCCAGGCGTTGCAGCGTTCCTGCCAGGGCCGTGAGGACTTTAAAGTGTCA 473 Query 56028 ATTCATGACCCGTGGGCTGCGGTCCAAAAGCCCCAAAAACAAGTGACCGCATGG 56081 || || || |||| || ||| | || || |||||| || ||||| ||| Sbjct 474 ATCCACGATCCGTTTGCCGCGTTGCAGAAAGGCCAAAAGGGCGTTACCGCCTGG 527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429858130663455