Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_010355.1 Length=62337 Score E Sequences producing significant alignments: (Bits) Value seq2705 86.0 2e-12 >seq2705 Length=325 Score = 86.0 bits (94), Expect = 2e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 6517 GAGGACATCAAGGAAGTCTACTCGGAAGCCAAGGGCACCGGGTTCGACGTCAAGATCATT 6576 || ||||||||||| ||||| ||||||||||||| ||| |||||||||||| | Sbjct 166 GACGACATCAAGGACGTCTATGGTGAAGCCAAGGGCAACGGCTTCGACGTCAAGGCGCTG 225 Query 6577 CGGCAGATCATCCGCTTGCGGAAGATGGACAAGGCCGACCGGCAGGAACAGCGCGCCATC 6636 || || |||||| |||| ||| |||| | ||| || ||||||||| | ||| Sbjct 226 CGCACCATTATCCGCATGCGCAAGCAGGACGCCGACGAGCGTCAGGAACAGGAGACGATC 285 Query 6637 CTCGAAATGTACGAGGAAGCGCTCGGGATG 6666 || |||| ||| | | ||||| |||||| Sbjct 286 CTGGAAACCTACATGCAGGCGCTAGGGATG 315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199317493387458