Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq14564 86.0 4e-12 >seq14564 Length=527 Score = 86.0 bits (94), Expect = 4e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 6879 TCGTTTACACCATCGCCGCCACAAATTGGTATAAACCCGTACAACAAATGTGTAAGATTA 6938 ||||| | ||||| |||||||| || || ||||||||||||| |||||| || || || Sbjct 397 TCGTTGATGCCATCACCGCCACAGATCGGGATAAACCCGTACAGCAAATGCGTCAGGTTT 338 Query 6939 GGAATGGGAATTTTGTCGGCGG-GATATTGTCTATCGTAAACACCCCATTCCACAAAGTA 6997 | || | || ||| ||| || ||| | |||| || |||||||||||||| || Sbjct 337 TGCGCCGGCAGCTTATCGACGGTGAAATT-ACGGCCGTATACGCCCCATTCCACAAAATA 279 Query 6998 AGCGCCCACAACATTATCGGTAATTTTTTCGAACGGTACATTGTTTTCCGACCACATATA 7057 || ||| || || || ||| | || || | ||| ||| |||||| || | | Sbjct 278 AGAGCCGACCACTTTGCCGGAATCTTGTTTATAAGGTTTATTCTTTTCCAACAGCGGTTC 219 Query 7058 TTTTATAGGATTTAAATGCGAACCGTCTGTATCGGCCAC 7096 ||||| || ||||| ||||| ||||||||||| Sbjct 218 TTTTAAGGGTGCCAAATGGCTGCCGTCGGTATCGGCCAC 180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347306684960813