Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_016767.1 Length=60714 Score E Sequences producing significant alignments: (Bits) Value seq11196 91.5 6e-14 >seq11196 Length=214 Score = 91.5 bits (100), Expect = 6e-14 Identities = 135/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 44535 GCGGTAGTCCAGCTCCGATTTCAGCCCCCACGCGAAGGCCGCCCGGATGTAGGAGCGAAC 44594 ||||||||| |||||||||||| ||||| | | || | ||||||||| || || Sbjct 188 GCGGTAGTCATGCTCCGATTTCATGCCCCAACTGTATGCGGAGCGGATGTAGCTTCGGAC 129 Query 44595 GTGGTCCGCCATGGAGTTTTTGCCGCGCTCGAAGATGGGCCGGAGCACGTTC-AGCACGT 44653 ||||| ||||| || | ||||| || ||| ||||||| |||| | |||| | | | Sbjct 128 ATGGTCTGCCATTGACCTCTTGCCCCGTTCGTAGATGGGGCGGATGA-GTTCGATGATCT 70 Query 44654 CCTCTGGCTCGATGTCGCGGGCGAGGCGGTTCCGGCCGAGACCATCCGTGATTTTATCCA 44713 | || |||||||| || || || ||||||| || || || || | ||| || | || Sbjct 69 CTTCCGGCTCGATTTCACGAGCAGGGCGGTTGCGCCCAAGCGTGTCGGCGATCTTGTTCA 10 Query 44714 GCCCCTTCT 44722 | ||||||| Sbjct 9 GGCCCTTCT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194128935170632