Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_018452.1 Length=61847 Score E Sequences producing significant alignments: (Bits) Value seq8365 82.4 3e-11 >seq8365 Length=642 Score = 82.4 bits (90), Expect = 3e-11 Identities = 134/191 (70%), Gaps = 9/191 (5%) Strand=Plus/Minus Query 54564 ATCGCGTTCATGCGCGA---CAACAAGGAGCATGCCAAGAAAGAGCGCCTGTTCGCGGAC 54620 ||||| ||||||| || ||| ||| | | || ||| | ||||||||||| ||| Sbjct 188 ATCGCCTTCATGCAGGATTTCAAGAAGTCGGAGGCGAAGCA---GCGCCTGTTCGGCGAC 132 Query 54621 ATGCGCGAGGGCAAAAAGCGCGTGCTGATCGGCGGCAAGGACA---TGGAAACCGGCGTC 54677 |||||| ||||| ||| | |||||||| || ||||| ||| ||||||||| Sbjct 131 GTGCGCGCCGGCAAGGTCCGCTTCCTGATCGGGAGCTCGGACACGATGGGGACCGGCGTC 72 Query 54678 AACGTGCAGAAGCGCCTCTACACCGAGGAGCATCTGGACGCGCCGTGGTTCCCGGCATCC 54737 |||| |||| ||||||| | || | | || || |||| ||||||| | ||| | Sbjct 71 AACGCGCAGCTGCGCCTCAAGGCCTTGCATCACCTCGACGTGCCGTGGCTGCCGTCGCAG 12 Query 54738 GTCGAGCAGCG 54748 |||||||||| Sbjct 11 ATCGAGCAGCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197753895345138