Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq21 93.3 8e-14 >seq21 Length=852027 Score = 93.3 bits (102), Expect = 8e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 221713 GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAG 221772 ||||| ||| || || ||||||||||| ||| | || |||| | || ||||| || | Sbjct 417977 GGCCAAGTTGCAGACAGCCACCTCGTCTTTGCTCGTGTACTCGACGACTTCTGTGCACAA 417918 Query 221773 GTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTT 221832 ||||||||| ||||| || |||| || || || || ||| |||||| |||||| || Sbjct 417917 GTTGCTGCATTTGATAGTTCCCAAGTTCTTCTGGTTGCTCTTCCGATTGCAAGCGTCTTT 417858 Query 221833 GTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATC 221878 ||| ||||| | || ||| ||||| | || ||| |||||| Sbjct 417857 GTACAGCATGTACGGCGTGCCCGTCTCGATTTGCGCCTGGAGAATC 417812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928672255467840