Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq9220 82.4 8e-11 >seq9220 Length=480 Score = 82.4 bits (90), Expect = 8e-11 Identities = 73/90 (81%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 26909 AATGCGCAAGTGGCGGAATTGGTAGACGCCCAGGTTTTAGGTACCTGTGCCCTAGTGG-C 26967 ||||| || |||||||||||||||||||| | || || |||| || ||| | || || | Sbjct 133 AATGCCCAGGTGGCGGAATTGGTAGACGCGCTGGCTTCAGGTGCCAGTGGCTTAACGGCC 192 Query 26968 GTGAAGGTTCAAGTCCTTTCTTGCGCATCA 26997 |||||||||| ||||||||| || ||| || Sbjct 193 GTGAAGGTTCGAGTCCTTTCCTGGGCACCA 222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516384057384000