Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq624 96.9 4e-15 >seq624 Length=795 Score = 96.9 bits (106), Expect = 4e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 138207 CCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCA 138266 || || || ||||| || |||||||| ||||| || | ||| ||||| | ||||| || Sbjct 794 CCGCCGCCGCCATGCGGGATACAGAAGGTCTTGTGCAGATTGAGATGGCTGACATCGGCG 735 Query 138267 CCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATAT 138326 || ||||| | || | || || ||||| || || | || || ||||||||||| Sbjct 734 CCGTAGTCGCCGGGCCGCGAGAGCCCGACCTGCGCGTTCATGTTGGCGCCATCGAGATAG 675 Query 138327 ACCTGACCACCATTGTCATGAACGATCTTACATATCTGTCTGATGTTTGTTTCAAATACA 138386 ||||| || |||| |||| ||||| | || |||| ||||| | || || || Sbjct 674 ACCTGCCCGCCATGCGCATGCACGATGTCGCAGATCTCGCTGATATGCTCCTCGAACACG 615 Query 138387 CCATGAGTCGATGGATATGTAATCAT 138412 || || ||||| ||||| || ||||| Sbjct 614 CCGTGGGTCGACGGATAGGTGATCAT 589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578890843809720