Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_021299.1 Length=80955 Score E Sequences producing significant alignments: (Bits) Value seq14788 140 2e-28 >seq14788 Length=481 Score = 140 bits (154), Expect = 2e-28 Identities = 148/194 (76%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 59263 CGTGCCATCAACTGGAACCGCGTCTTTGACGACAAGGATCTTGAGGTCTGGAACCGGTTG 59322 || || |||||||||||| | | |||||||||||||| ||||| |||||||| || Sbjct 229 CGCGCAATCAACTGGAACATCATTGAAGACGACAAGGATCTGGAGGTGTGGAACCGTCTG 170 Query 59323 ACCAACAACTTCTGGCTGCCAGAGAAGATCCCTGTCTCCAACGACATCCCGGCCTGGGGC 59382 ||| |||||||||||||||||| || | || | || |||||||| ||| | |||| Sbjct 169 ACCTCCAACTTCTGGCTGCCAGAAAAAGTGCCGTTGTCGAACGACATTCCGTCGTGGGCA 110 Query 59383 ACGCTGACGG---AGGAAGAGCAAGTCCTCACGATGCGGGTCTTCACCGGCCTGACGATG 59439 || ||||| ||||| ||||| || || || ||||| ||||||||||||||| || Sbjct 109 ACATTGACGCCAAAGGAACAGCAA---CTGACCATCCGGGTGTTCACCGGCCTGACGCTG 53 Query 59440 CTCGACACGATCCA 59453 ||||| || || || Sbjct 52 CTCGATACCATTCA 39 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 258884302785636