Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_021563.1 Length=42724 Score E Sequences producing significant alignments: (Bits) Value seq7453 86.0 2e-12 >seq7453 Length=769 Score = 86.0 bits (94), Expect = 2e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 3218 CGCAGCGACCTACCGATAATTTGTTGCAGCAACCCGGGTGATTCGGTGGCTCGCAGAATA 3277 |||||| | ||||| |||||| || || | | |||||| || | || ||||| Sbjct 58 CGCAGCCCACGACCGACAATTTGCTGATACAGGCTGACTGATTCAGTCGGGCGAAGAATG 117 Query 3278 GCAATCAGGTCAACGTGAGGGGCATCAAAGCCAGTAGTCAACACGTCGACATTAACCAGA 3337 |||||||| || ||||| || |||||||||||||| || ||||| ||||||| ||||| Sbjct 118 GCAATCAGATCGACGTGCGGCGCATCAAAGCCAGTGGTTAACACCGCGACATTGACCAGG 177 Query 3338 TA 3339 || Sbjct 178 TA 179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136571094447452