Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_022067.1 Length=109960 Score E Sequences producing significant alignments: (Bits) Value seq3432 95.1 9e-15 >seq3432 Length=476 Score = 95.1 bits (104), Expect = 9e-15 Identities = 125/173 (72%), Gaps = 3/173 (2%) Strand=Plus/Minus Query 95684 TTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATG 95743 ||||| ||| |||| || ||||| || |||||||| || || |||| | ||| | | Sbjct 285 TTGATGGTGCCGGTGATGACGTCCACCGACGGCCGCTGGGTGGCGAGGATCACATGCAGG 226 Query 95744 CCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTCTTGTAG 95803 ||||| ||||||||| |||| |||| ||| | | | | |||| || |||| | Sbjct 225 CCGGCGGCGCGCGCCATCTGCGCGAGGCGCTGCACGGCGCCTTCGATGTC---CTTGCCG 169 Query 95804 CCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGATGTAGGGGAG 95856 || ||||||| ||||| |||| ||||||||| | | ||||||||||| || Sbjct 168 GCGACCATCATCAGGTCGGCCATCTCGTCGACGATGATGACGATGTAGGGCAG 116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351683492096741