Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq57 84.2 2e-11 >seq57 Length=138120 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 50363 AGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCA 50422 |||| | ||||| |||||||| || |||||||||||||| |||||||| ||| |||| Sbjct 25694 AGGCTTGATGCCGGGCCTCACTTTCTCGAACGAGTTGATTTCTCGCGACGAGGGACTGCA 25635 Query 50423 CACAGACTTTGCGTGT 50438 | |||||||||||||| Sbjct 25634 CGCAGACTTTGCGTGT 25619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488453246845200