Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_024148.1 Length=50101 Score E Sequences producing significant alignments: (Bits) Value seq11859 80.6 9e-11 >seq11859 Length=257 Score = 80.6 bits (88), Expect = 9e-11 Identities = 62/74 (84%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 3799 AGGCGCGTAGCTCAATTGGAAGAGCAGCGGTCTCCAAAGCCGCCGGCTGCAGGTTCGAGC 3858 ||| | ||||||||||||| |||||| ||||||||||| ||| || |||||||||||| Sbjct 148 AGGAGTGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGGGTCGCAGGTTCGAGC 207 Query 3859 CCTGCCGCGTCTGC 3872 |||||| | |||| Sbjct 208 CCTGCCACTCCTGC 221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160173328522766