Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_024771.1 Length=151601 Score E Sequences producing significant alignments: (Bits) Value seq9797 89.7 5e-13 >seq9797 Length=509 Score = 89.7 bits (98), Expect = 5e-13 Identities = 137/192 (71%), Gaps = 5/192 (3%) Strand=Plus/Plus Query 107358 ACCCCCTGGAGGGCCCACTTTTCCAGGTAGCCGTGGGCGGGGAGGCGAAATGCCGGG-TA 107416 || |||||| |||||| | || ||| ||||||| || | |||| ||||||| | | Sbjct 2 ACGCCCTGGCCGGCCCAATGCTCGAGGAAGCCGTGC-CGCGCCGGCGGAATGCCGAGATC 60 Query 107417 GGTCTTTTGCACCGCCGCGTAGATGTTGCGCAGGCTTGGGGGAACTGGCACCCCCTTTCG 107476 || || || | || |||||||||| |||||| || || |||| ||| || Sbjct 61 GGCCTC---CATCTCCTTGTAGATGTTGACCAGGCTGGGCGGGGTGCGCACGCCCGGCCG 117 Query 107477 CACGCTGAAAGCCAGCCCGTGCGCCTGGCCGGGGCCGTGGTAGGGGTCCTGGCCGACGAT 107536 ||| ||| |||||||||||||||||| ||| || ||||| |||||||||| ||| Sbjct 118 CACCGAGAAGCACAGCCCGTGCGCCTGGCCCTCGCCATGATAGGGATCCTGGCCGAGGAT 177 Query 107537 CACAACGCGCAC 107548 || ||||| || Sbjct 178 GACGACGCGGAC 189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484905106079160