Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq14564 125 6e-24 >seq14564 Length=527 Score = 125 bits (138), Expect = 6e-24 Identities = 186/264 (70%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 59923 AAAGTCGTTGCCGCATATTTTGTCGAATGGGGTGTTTATCCTAGAAATTTTCCTGTAGAT 59982 ||||| || | | | |||||||| |||||||| || || | ||||| | || ||| Sbjct 264 AAAGTGGTCGGCTCTTATTTTGTGGAATGGGGCGTATACGGCCGTAATTTCACCGTCGAT 323 Query 59983 CGAGTGCCCACTCCTAATCTATCGCATATTCTATACGGATTTATTCCGATATGCGGCGGC 60042 |||| | | || || ||||| | || ||||| ||||| ||||| || ||||| Sbjct 324 AAGCTGCCGGCGCAAAACCTGACGCATTTGCTGTACGGGTTTATCCCGATCTGTGGCGGT 383 Query 60043 GACGGTATCAACGACAGTCTTAAAACCATAACCGGTAGTTTCGAAGCGCTTCAGCGATCG 60102 || || |||||||||||||| ||| || ||||| ||| | ||| | ||||| || Sbjct 384 GATGGCATCAACGACAGTCTGAAAGAGATCGAAGGTAGCTTCCAGGCGTTGCAGCGTTCC 443 Query 60103 TGTTCAGGTCGAGACGACTTTAAAGTATCAATTCACGATCCATGGGCCGCCGTCCAGAAA 60162 || || || || ||||||||||| ||||| |||||||| | ||||| | |||||| Sbjct 444 TGCCAGGGCCGTGAGGACTTTAAAGTGTCAATCCACGATCCGTTTGCCGCGTTGCAGAAA 503 Query 60163 CCCCAAAAACAAGTAACCGCTTGG 60186 |||||| || ||||| ||| Sbjct 504 GGCCAAAAGGGCGTTACCGCCTGG 527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445011718151520