Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_026594.1 Length=56537 Score E Sequences producing significant alignments: (Bits) Value seq11982 98.7 4e-16 >seq11982 Length=641 Score = 98.7 bits (108), Expect = 4e-16 Identities = 129/177 (73%), Gaps = 4/177 (2%) Strand=Plus/Plus Query 36713 TCGGCCCTGCGGGCACCGGGAAGACCTTCCTGGCCATTCACCACGGACTGCGC--CTGCT 36770 ||||||| || |||||||| ||||||| || || | ||| | | |||| ||| | Sbjct 441 TCGGCCCGGCCGGCACCGGCAAGACCTGGCTCGCAGTCGCCCATG--CCGCGCAGCTGTT 498 Query 36771 GGAGGCCAAGGAAATCCAGCGACTCGTCATCACTCGCCCCGCCGTCGAGGCCGAGGAGAA 36830 ||| |||||| || | || || || | || || ||||| |||||||||| ||| Sbjct 499 CGAGCGCAAGGAGGTCGACCGCATCATCCTGACGCGGCCCGCGGTCGAGGCCGGCGAGCG 558 Query 36831 GCTCGGCTACCTGCCCGGCGGCATCGAAGAGAAGATGGCTCCGTACCTGATCCCGAT 36887 |||||||| ||||||||||| | || | |||||| | | |||||| ||| |||||| Sbjct 559 GCTCGGCTTCCTGCCCGGCGACCTCAAGGAGAAGGTCGATCCGTATCTGCGCCCGAT 615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180764893997718