Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30]
14,861 sequences; 67,701,403 total letters
Query= NC_026927.1
Length=228143
Score E
Sequences producing significant alignments: (Bits) Value
seq9075 100 4e-16
>seq9075
Length=545
Score = 100 bits (110), Expect = 4e-16
Identities = 244/365 (67%), Gaps = 6/365 (2%)
Strand=Plus/Minus
Query 161174 GAGATCTACAACCTAGGGGCACAGAGTCATGTGAAAGTATCTTTCGAGGAACCTGAATAT 161233
|||||||||||||| | || ||||| || || | || ||||||| || |||||
Sbjct 384 GAGATCTACAACCTCGCCGCCCAGAGCCACGTCCAGGTCAGTTTCGAGAGCCCGGAATAC 325
Query 161234 ACAGCACAGACTGATGCTCTGGGAACCCTAAGAGTATTGGAGGCAGTTCGTCTCCTAGGT 161293
|| || | | || || | || || | | ||||||| | || |||| ||
Sbjct 324 ACCGCCAATGCCGACGCCATCGGCGTGCTGCGCCTGCTGGAGGCGATCCGCATCCTCGGC 265
Query 161294 ATGACAGATAGGGTCC-GTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACA 161352
||| ||| | | || | |||||||||| || ||| ||| |||| ||| | || ||
Sbjct 264 ATGG-AGAAGGAGACCCGGTTCTACCAGGCCTCGACCTCGGAGCTGTACGGGCTCGTGCA 206
Query 161353 AGAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAA 161412
||| || ||||| || || || || || || || || || || || ||||| || ||
Sbjct 205 GGAGGTGCCGCAGAAGGAGACCACGCCGTTTTATCCGCGTTCGCCCTACGGCGTCGCCAA 146
Query 161413 ACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAG 161472
|| || || || ||||| ||||||| | ||| || || ||| |||||| |
Sbjct 145 GCTGTACGGCTACTGGATCACGGTGAACTACCGCGAGGCCTACGGCATGTTCGCCAGCAA 86
Query 161473 TGGTATTCTATTCAACCATGAGTCACCACGA--CGGGGTGAGACTTTCGTAACCCGTAAG 161530
|| || || |||||||||||| | | ||| || || ||||| ||||| || || |||
Sbjct 85 CGGCATCCTGTTCAACCATGAG--AGCCCGATCCGCGGCGAGACCTTCGTGACGCGCAAG 28
Query 161531 ATTAC 161535
|| ||
Sbjct 27 ATCAC 23
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 729794006452680
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |