Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_027340.1 Length=162160 Score E Sequences producing significant alignments: (Bits) Value seq2293 82.4 8e-11 >seq2293 Length=1342 Score = 82.4 bits (90), Expect = 8e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 56449 cccTGAATGGAGTCCAACATAACCTGGCGCTTCAGGTTGCTGATGAAGATATGCTTCTCG 56508 |||||||| || ||||||| |||| ||||| ||||||||||| || || ||||| Sbjct 923 CCCTGAATCGAATCCAACAGCGTCTGGTATTTCAGATTGCTGATGAAAATGTGTTTCTCA 864 Query 56509 TGCTCTTCCAGAGACTCAAAATCAGCCTTGTCTTTGGTGACGTCAACTTCTTCAGGACGC 56568 || || ||| | || | | ||| ||| || |||||||||||||||||||||| Sbjct 863 TGATCCGGCAGTGCCTGATAGTCAATACGGTCGCGGGAGACGTCAACTTCTTCAGGACGC 804 Query 56569 CAGAA 56573 ||||| Sbjct 803 CAGAA 799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518687629387200