Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq9046 82.4 7e-11 >seq9046 Length=208 Score = 82.4 bits (90), Expect = 7e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 34576 GATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTC 34635 ||||||||| || ||||||||| ||| | ||| ||||| ||||| || || | |||| Sbjct 99 GATGGCGCTGCCGCCGTGCCACTGCCTGTTCCAGTTCTATGTCGCCAACGGAAAATTGTC 158 Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCA 34685 ||||||||||||||| || || || ||| || | || ||||| |||| Sbjct 159 CTGCCAGCTCTATCAGCGCTCCGGCGACGTGTTCCTCGGCGTGCCCTTCA 208 Score = 82.4 bits (90), Expect = 7e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 6660 TGAACGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCC 6719 |||| ||||| || | || ||| || || || ||||||||||||||||||| | | Sbjct 208 TGAAGGGCACGCCGAGGAACACGTCGCCGGAGCGCTGATAGAGCTGGCAGGACAATTTTC 149 Query 6720 CATTCGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATC 6769 | || ||||| ||||| ||| | ||| ||||||||| || ||||||||| Sbjct 148 CGTTGGCGACATAGAACTGGAACAGGCAGTGGCACGGCGGCAGCGCCATC 99 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448179129655920