Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq14788 107 1e-18 >seq14788 Length=481 Score = 107 bits (118), Expect = 1e-18 Identities = 134/184 (73%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 78263 GTGTGGGATCGACTCACCGGCAACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGAC 78322 |||||| | || || ||| |||||||||| |||| || || || ||| |||| |||||| Sbjct 184 GTGTGGAACCGTCTGACCTCCAACTTCTGGCTGCCAGAAAAAGTGCCGTTGTCGAACGAC 125 Query 78323 ATCCCATCCTGGGACACCCTTACGCCGGAAGAGAAGGAACTCACTATGCGTGTGTTCACC 78382 || || || |||| || | ||||| | || || |||| || || || ||||||||| Sbjct 124 ATTCCGTCGTGGGCAACATTGACGCCAAAGGAACAGCAACTGACCATCCGGGTGTTCACC 65 Query 78383 GGCCTCACCCTGCTCGACACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCCGAC 78442 ||||| || |||||||| ||||| || || || || || | || |||||||| Sbjct 64 GGCCTGACGCTGCTCGATACCATTCAAAATACCGTCGGGGCACCGGCACTGATCGCCGAT 5 Query 78443 GCCA 78446 |||| Sbjct 4 GCCA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299267387339498