Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq1309 109 9e-19 >seq1309 Length=710 Score = 109 bits (120), Expect = 9e-19 Identities = 146/202 (72%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 203407 GAGTTCGTCTGGACAGGCGGTGATACACATCTGTATTCCAACCATCTGGAGCAGGCCCGT 203466 || ||||| ||||| | || || ||||||||||| ||| ||| |||| || ||| Sbjct 697 GATTTCGTTTGGAC--GTGGCGACACACATCTGTACAGCAATCATATGGAACAAACCCAG 640 Query 203467 CTGCAGTTAACTCGTGACCCGCACCCATTACCGCGTCTGAAATTCAAACGTAAGCCCGAG 203526 || || || || || || |||| | | || || ||| ||||||| || || | Sbjct 639 CTACAATTGACCCGCGAACCGCGCGCGTTGCCTAAGCTGGTGATCAAACGCAAACCGGCA 580 Query 203527 TCTATCTTCGACTACCAGTTCGAAGACTTTGAAATCGAAGGCTACGTTTCCCACGACGCC 203586 || | ||||| |||| ||||| || |||||||||||||| |||| | | ||| ||| Sbjct 579 TCGCTGTTCGATTACCGTTTCGAGGATTTTGAAATCGAAGGTTACGATCCGCACCCAGCC 520 Query 203587 ATCAAAGCACCGGTTGCCATTT 203608 ||||| |||||||||||||||| Sbjct 519 ATCAAGGCACCGGTTGCCATTT 498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 788173559706000