Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000447165.1_202013-08-13] 36,360 sequences; 51,498,142 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq35672 127 2e-24 >seq35672 Length=222 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||| |||||||| | ||| || ||||| || | ||| || || || ||| | Sbjct 7 CGCAAGACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCAGACAGAGTTCGGCCG 66 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||| ||| || || |||| || | | |||||||| || ||||||||||| ||| Sbjct 67 TCCTCCAACTGCTTGCCAGCAAAAATCAGACGCTGCTGATCAGGGGGAATACCTTCCTTG 126 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || |||||||| || ||| ||||| | | || || |||| |||||| Sbjct 127 TCCTGGATCTTTGCCTTCACATTCTCGATGGTGTCTGACGGCTCAACATCAAGCGTGATA 186 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| |||||||| ||||||||||||||||| Sbjct 187 GTCTTTCCGGTAAGAGTCTTCACAAAGATCTGCAT 221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448087451649600