Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000447165.1_202013-08-13] 36,360 sequences; 51,498,142 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1218 114 1e-20 >seq1218 Length=18807 Score = 114 bits (126), Expect = 1e-20 Identities = 143/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||||||||| || || | |||| |||||||||||||| ||||| Sbjct 15527 TCCTTCTGGATGTTGTAGTCGGAAAGGGTTCTGCCGTCCTCGAGCTGCTTGCCTGCGAAG 15468 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| ||||||||||| | ||| | | |||||| ||| ||||| ||||| | Sbjct 15467 ATCAGACGCTGCTGGTCAGGCGGAATTCCCTCCTTATCCTGAATCTTGGCCTTGACATTT 15408 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||| | || || |||| ||||| || ||||| || ||||| || || Sbjct 15407 TCGATGGTGTCAGAAGGCTCGACGTCCAAAGTGATCGTCTTGCCGGTGAGCGTCTTCACG 15348 Query 46583 AAGATTTGCATTTTGC 46598 || || |||||||||| Sbjct 15347 AAAATCTGCATTTTGC 15332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564981499147200