Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000447165.1_202013-08-13] 36,360 sequences; 51,498,142 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq36021 102 1e-15 >seq36021 Length=4195 Score = 102 bits (112), Expect = 1e-15 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 |||| || || | ||||||||||| || || |||||||||||||||||||||||||| Sbjct 3949 TCCAGAGGGCACAGAAGAGGTCGCGAGCACGTCGCTCCTCCTTGCCGTGGTTCTTTTTGA 3890 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 1628584 |||||| | |||| | || |||||| ||||||| ||| ||| | | ||| | Sbjct 3889 TGTCGAGGAAATCGAAGACATCAAAGTGCCATGGCTCCAAGTAAATGGCGAGGCTGCCTT 3830 Query 1628585 TGCGCTTGCCGCCGCC 1628600 |||| ||||||||||| Sbjct 3829 TGCGTTTGCCGCCGCC 3814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6104155328126120