Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000447165.1_202013-08-13] 36,360 sequences; 51,498,142 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1218 116 9e-21 >seq1218 Length=18807 Score = 116 bits (128), Expect = 9e-21 Identities = 139/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || |||||||| || || |||||||||||||| || || ||||||||| ||||| Sbjct 15352 AAGACGCTCACCGGCAAGACGATCACTTTGGACGTCGAGCCTTCTGACACCATCGAAAAT 15411 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || || |||||| ||| ||| || | || |||||| Sbjct 15412 GTCAAGGCCAAGATTCAGGATAAGGAGGGAATTCCGCCTGACCAGCAGCGTCTGATCTTC 15471 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| | || || || || || | |||| |||||| ||||||| || || Sbjct 15472 GCAGGCAAGCAGCTCGAGGACGGCAGAACCCTTTCCGACTACAACATCCAGAAGGAATCC 15531 Query 206365 ACTCTTCAC 206373 ||||| ||| Sbjct 15532 ACTCTCCAC 15540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181270234007560